RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 TRIM40Q6P9F5 258 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ZNF467Q7Z7K2 595 aaPredicted RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 PLA2G15Q8NCC3 412 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 NEIL2Q969S2 332 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 PPCDCQ96CD2 204 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ZNF578Q96N58 590 aaPredicted RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 ZNF558Q96NG5 402 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ZNF416Q9BWM5 594 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 POLDIP3Q9BY77 421 aaKnown RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 CYSLTR2Q9NS75 346 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CYB5R1Q9UHQ9 305 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CORO2BQ9UQ03 480 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 BAIAP2Q9UQB8 552 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 SPEGQ15772 3267 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ARID1BQ8NFD5 2236 aaPredicted RBP7.46□□□□□ -1.21
TPM3-215ENST00000469717 TRBV5-4A0A0C4DH59 114 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 RTCAO00442 366 aaKnown RBP7.46□□□□□ -1.21
TPM3-215ENST00000469717 SLC16A8O95907 504 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 ADRB1P08588 477 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 CLTBP09497 229 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 PPIBP23284 216 aaKnown RBP7.46□□□□□ -1.21
TPM3-215ENST00000469717 CORO1AP31146 461 aaKnown RBP7.46□□□□□ -1.21
TPM3-215ENST00000469717 THBS2P35442 1172 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 TRIM23P36406 574 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 PITPNBP48739 271 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 DGKGP49619 791 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 VEGFCP49767 419 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 CDH4P55283 916 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 SYPL1Q16563 259 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 ANXA8L1Q5VT79 327 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 RPTNQ6XPR3 784 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 TOMM5Q8N4H5 51 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 OR5M3Q8NGP4 307 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 HGDQ93099 445 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 NPAS1Q99742 590 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 DPH7Q9BTV6 452 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 SLC6A16Q9GZN6 736 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 REEP4Q9H6H4 257 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 TAS2R7Q9NYW3 318 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 A4GNTQ9UNA3 340 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 MGAT4BQ9UQ53 548 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 ANGPT4Q9Y264 503 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 CSNK1G3Q9Y6M4 447 aa7.46□□□□□ -1.21
TPM3-215ENST00000469717 RIF1Q5UIP0 2472 aaKnown RBP7.46□□□□□ -1.21
TPM3-215ENST00000469717 A0A1W2PRB8 838 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 SLC9B1P1A6NJY1 282 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 ANXA2P2A6NMY6 339 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 E9PI62 339 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 NPIPB8E9PQR5 432 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 SOCS6O14544 535 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 PIP5K1CO60331 668 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 IL3P08700 152 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 FURINP09958 794 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 H2AFB2P0C5Z0 115 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 SNRPBP14678 240 aaKnown RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 PRKAR1BP31321 381 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 CSKP41240 450 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 HSPB3Q12988 150 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 OR5M10Q6IEU7 315 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 RGS7BPQ6MZT1 257 aaPredicted RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 METAP1DQ6UB28 335 aaPredicted RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 C3P1Q6ZMU1 363 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 PAQR7Q86WK9 346 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 RELL2Q8NC24 303 aaPredicted RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 SCAMP4Q969E2 229 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 YIPF5Q969M3 257 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 ORAI1Q96D31 301 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 ZNF436Q9C0F3 470 aaPredicted RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 OR10A4Q9H209 315 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 TMEM38AQ9H6F2 299 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 MED20Q9H944 212 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 MAN2C1Q9NTJ4 1040 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 ENOPH1Q9UHY7 261 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 POMT2Q9UKY4 750 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 ARID1AO14497 2285 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 ALPK2Q86TB3 2170 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 TMEM129A0AVI4 362 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 PRAMEF27A3QJZ7 478 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 C5orf58C9J3I9 102 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 PDCD5O14737 125 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 VNN2O95498 520 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 ATP6V1E1P36543 226 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 UBE2MP61081 183 aaKnown RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 ZNF630Q2M218 657 aaPredicted RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 REEP3Q6NUK4 255 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 MZT2AQ6P582 158 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 APCDD1Q8J025 514 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 OXR1Q8N573 874 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 OR51Q1Q8NH59 317 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 TRMT10AQ8TBZ6 339 aaKnown RBP7.46□□□□□ -1.22
TPM3-215ENST00000469717 PXYLP1Q8TE99 480 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 BADQ92934 168 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 YIPF4Q9BSR8 244 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 GSDMCQ9BYG8 508 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 NTNG1Q9Y2I2 539 aa7.46□□□□□ -1.22
TPM3-215ENST00000469717 VWA8A3KMH1 1905 aa7.45□□□□□ -1.22
TPM3-215ENST00000469717 SOX30O94993 753 aa7.45□□□□□ -1.22
TPM3-215ENST00000469717 TFP02787 698 aa7.45□□□□□ -1.22
TPM3-215ENST00000469717 HLA-DPB1P04440 258 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms