RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ZFP36L2P47974 494 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 PAX9P55771 341 aa2.53□□□□□ -2
HPS3-203ENST00000460822 PEX3P56589 373 aa2.53□□□□□ -2
HPS3-203ENST00000460822 RPL23AP62750 156 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 NOP14P78316 857 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 POU3F1Q03052 451 aaPredicted RBP2.53□□□□□ -2
HPS3-203ENST00000460822 NCBP1Q09161 790 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 RBBP5Q15291 538 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 SYCP1Q15431 976 aa2.53□□□□□ -2
HPS3-203ENST00000460822 CDKN3Q16667 212 aa2.53□□□□□ -2
HPS3-203ENST00000460822 LINC01620Q4KN68 170 aa2.53□□□□□ -2
HPS3-203ENST00000460822 FFAR4Q5NUL3 377 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ARMC12Q5T9G4 340 aa2.53□□□□□ -2
HPS3-203ENST00000460822 DMKNQ6E0U4 476 aaPredicted RBP2.53□□□□□ -2
HPS3-203ENST00000460822 SLC35E4Q6ICL7 350 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ZSCAN25Q6NSZ9 544 aa2.53□□□□□ -2
HPS3-203ENST00000460822 DPY19L4Q7Z388 723 aa2.53□□□□□ -2
HPS3-203ENST00000460822 GPR142Q7Z601 462 aa2.53□□□□□ -2
HPS3-203ENST00000460822 VPS36Q86VN1 386 aa2.53□□□□□ -2
HPS3-203ENST00000460822 OR4N5Q8IXE1 308 aa2.53□□□□□ -2
HPS3-203ENST00000460822 CCDC36Q8IYA8 594 aa2.53□□□□□ -2
HPS3-203ENST00000460822 LRRC75A-AS1Q8N1F1 130 aa2.53□□□□□ -2
HPS3-203ENST00000460822 GVQW1Q8N7I0 195 aa2.53□□□□□ -2
HPS3-203ENST00000460822 NECAB1Q8N987 351 aa2.53□□□□□ -2
HPS3-203ENST00000460822 OR9Q2Q8NGE9 314 aa2.53□□□□□ -2
HPS3-203ENST00000460822 OR10V1Q8NGI7 309 aa2.53□□□□□ -2
HPS3-203ENST00000460822 MAPK15Q8TD08 544 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ANKRD49Q8WVL7 239 aa2.53□□□□□ -2
HPS3-203ENST00000460822 SPRYD4Q8WW59 207 aaPredicted RBP2.53□□□□□ -2
HPS3-203ENST00000460822 PNPLA2Q96AD5 504 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ZNF524Q96C55 264 aa2.53□□□□□ -2
HPS3-203ENST00000460822 PLEKHF1Q96S99 279 aa2.53□□□□□ -2
HPS3-203ENST00000460822 NPY6RQ99463 290 aa2.53□□□□□ -2
HPS3-203ENST00000460822 FUCA2Q9BTY2 467 aa2.53□□□□□ -2
HPS3-203ENST00000460822 FAM192AQ9GZU8 254 aa2.53□□□□□ -2
HPS3-203ENST00000460822 KCNK13Q9HB14 408 aa2.53□□□□□ -2
HPS3-203ENST00000460822 PLEKHA3Q9HB20 300 aa2.53□□□□□ -2
HPS3-203ENST00000460822 RAB18Q9NP72 206 aa2.53□□□□□ -2
HPS3-203ENST00000460822 RPRD1BQ9NQG5 326 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 STARD5Q9NSY2 213 aa2.53□□□□□ -2
HPS3-203ENST00000460822 PCSK1NQ9UHG2 260 aa2.53□□□□□ -2
HPS3-203ENST00000460822 LNPEPQ9UIQ6 1025 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ERRFI1Q9UJM3 462 aaPredicted RBP2.53□□□□□ -2
HPS3-203ENST00000460822 ZNF346Q9UL40 294 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 TCF19Q9Y242 345 aa2.53□□□□□ -2
HPS3-203ENST00000460822 CHTOPQ9Y3Y2 248 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 RNF215Q9Y6U7 377 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ZHX2Q9Y6X8 837 aa2.53□□□□□ -2
HPS3-203ENST00000460822 PTPRUQ92729 1446 aa2.53□□□□□ -2
HPS3-203ENST00000460822 SETD1AO15047 1707 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 CAMSAP1Q5T5Y3 1602 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ZCCHC11Q5TAX3 1644 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 N4BP2Q86UW6 1770 aaPredicted RBP2.53□□□□□ -2
HPS3-203ENST00000460822 EFCAB6Q5THR3 1501 aa2.53□□□□□ -2.01
HPS3-203ENST00000460822 CLTCQ00610 1675 aaKnown RBP2.53□□□□□ -2.01
HPS3-203ENST00000460822 LOC105371242A0A075B767 164 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 TTC26A0AVF1 554 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 FAM172BPA6NC97 362 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 METTL21EPA6NDL7 271 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 IFITM10A6NMD0 228 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 WASHC1A8K0Z3 465 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 PES1O00541 588 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 CASC3O15234 703 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 ALOX15BO15296 676 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 PRSS1P07477 247 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 SLC35G4P0C7Q5 338 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 PNMTP11086 282 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 UQCRBP14927 111 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 MT3P25713 68 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 LINC01547P58512 204 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 MRPS6P82932 125 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 RIGQ13278 110 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 ITPK1Q13572 414 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 GCKRQ14397 625 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 SLC17A1Q14916 467 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 TEAD2Q15562 447 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 MAPK6Q16659 721 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 ZNF562Q6V9R5 426 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 Q7L0L9 218 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CHMP1BQ7LBR1 199 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 C16orf62Q7Z3J2 963 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RANBP3LQ86VV4 465 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 HOGA1Q86XE5 327 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CATSPERDQ86XM0 798 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 VSTM4Q8IW00 320 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 UBE2J2Q8N2K1 259 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RFLNBQ8N5W9 214 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 OR5AU1Q8NGC0 362 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 OR5D13Q8NGL4 314 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RAB3IL1Q8TBN0 382 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 DNASE2BQ8WZ79 361 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RPL3LQ92901 407 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 PRICKLE1Q96MT3 831 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 APOOQ9BUR5 198 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 DHX33Q9H6R0 707 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 ZNF334Q9HCZ1 680 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 NRN1Q9NPD7 142 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 HOXC10Q9NYD6 342 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 GPR83Q9NYM4 423 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 ATP10DQ9P241 1426 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms