RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ZNF350Q9GZX5 532 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 SLC38A1Q9H2H9 487 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 MMADHCQ9H3L0 296 aaPredicted RBP16.02■□□□□ 0.16
SGCE-206ENST00000445866 POLE3Q9NRF9 147 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 RYDENQ9NUL5 291 aaKnown RBP16.02■□□□□ 0.16
SGCE-206ENST00000445866 ANGPT4Q9Y264 503 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 ZNF451Q9Y4E5 1061 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 PCSK5Q92824 1860 aa16.02■□□□□ 0.16
SGCE-206ENST00000445866 OR6C70A6NIJ9 312 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 ABCB7O75027 752 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 UTS2O95399 124 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 CYP4B1P13584 511 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 PCGF2P35227 344 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 CD96P40200 585 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 CYB561P49447 251 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 MFAP5Q13361 173 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 INTS11Q5TA45 600 aaKnown RBP16.02■□□□□ 0.15
SGCE-206ENST00000445866 PGM2L1Q6PCE3 622 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 OR4C3Q8NH37 302 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 FIG4Q92562 907 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 TMCO6Q96DC7 493 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 SPACA9Q96E40 222 aaPredicted RBP16.02■□□□□ 0.15
SGCE-206ENST00000445866 HOXD1Q9GZZ0 328 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 PCDHAC1Q9H158 963 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 RUBCNLQ9H714 662 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 BCL2L10Q9HD36 194 aa16.02■□□□□ 0.15
SGCE-206ENST00000445866 CROCCQ5TZA2 2017 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 NUP210LQ5VU65 1888 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 CXCR6O00574 342 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 TP53I11O14683 189 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 ZIC2O95409 532 aaPredicted RBP16.01■□□□□ 0.15
SGCE-206ENST00000445866 ITGB2P05107 769 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 NCK1P16333 377 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 CASRP41180 1078 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 NTRK2Q16620 822 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 PRAMEF8Q5VWM4 474 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 PRAMEF7Q5VXH5 474 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 GLYATQ6IB77 296 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 TYW3Q6IPR3 259 aaKnown RBP16.01■□□□□ 0.15
SGCE-206ENST00000445866 FRRS1Q6ZNA5 592 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 KRT73Q86Y46 540 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 ULK2Q8IYT8 1036 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 DND1Q8IYX4 353 aaKnown RBP16.01■□□□□ 0.15
SGCE-206ENST00000445866 OR10G3Q8NGC4 313 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 BBS10Q8TAM1 723 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 CCDC124Q96CT7 223 aaKnown RBP16.01■□□□□ 0.15
SGCE-206ENST00000445866 SGCZQ96LD1 299 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 ZNF607Q96SK3 696 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 SAP130Q9H0E3 1048 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 UBQLN4Q9NRR5 601 aa16.01■□□□□ 0.15
SGCE-206ENST00000445866 CCDC88CQ9P219 2028 aa16■□□□□ 0.15
SGCE-206ENST00000445866 NPIPA5A0A0B4J1W7 369 aa16■□□□□ 0.15
SGCE-206ENST00000445866 NPIPA7E9PJI5 369 aa16■□□□□ 0.15
SGCE-206ENST00000445866 MKRN2OSH3BPM6 223 aa16■□□□□ 0.15
SGCE-206ENST00000445866 M0QX08 132 aa16■□□□□ 0.15
SGCE-206ENST00000445866 GUSBP08236 651 aa16■□□□□ 0.15
SGCE-206ENST00000445866 NPIPA8P0DM63 369 aa16■□□□□ 0.15
SGCE-206ENST00000445866 HPGDP15428 266 aa16■□□□□ 0.15
SGCE-206ENST00000445866 LCN1P31025 176 aa16■□□□□ 0.15
SGCE-206ENST00000445866 ATP12AP54707 1039 aa16■□□□□ 0.15
SGCE-206ENST00000445866 TUBA3CQ13748 450 aa16■□□□□ 0.15
SGCE-206ENST00000445866 TRIM25Q14258 630 aaKnown RBP16■□□□□ 0.15
SGCE-206ENST00000445866 AP1ARQ63HQ0 302 aa16■□□□□ 0.15
SGCE-206ENST00000445866 TUBA3EQ6PEY2 450 aa16■□□□□ 0.15
SGCE-206ENST00000445866 C19orf48Q6RUI8 117 aa16■□□□□ 0.15
SGCE-206ENST00000445866 HMGN2P46Q86SG4 172 aa16■□□□□ 0.15
SGCE-206ENST00000445866 CYP4Z2PQ8N1L4 340 aa16■□□□□ 0.15
SGCE-206ENST00000445866 ZNF619Q8N2I2 560 aa16■□□□□ 0.15
SGCE-206ENST00000445866 TTC9Q92623 222 aa16■□□□□ 0.15
SGCE-206ENST00000445866 HAS2Q92819 552 aa16■□□□□ 0.15
SGCE-206ENST00000445866 PMM1Q92871 262 aa16■□□□□ 0.15
SGCE-206ENST00000445866 CRELD1Q96HD1 420 aa16■□□□□ 0.15
SGCE-206ENST00000445866 CNTNAP3BQ96NU0 1288 aa16■□□□□ 0.15
SGCE-206ENST00000445866 SMAD5Q99717 465 aaKnown RBP16■□□□□ 0.15
SGCE-206ENST00000445866 CNTNAP3Q9BZ76 1288 aa16■□□□□ 0.15
SGCE-206ENST00000445866 LRFN1Q9P244 771 aa16■□□□□ 0.15
SGCE-206ENST00000445866 ZNF232Q9UNY5 417 aa16■□□□□ 0.15
SGCE-206ENST00000445866 ICOSLGO75144 302 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 GCM2O75603 506 aaPredicted RBP15.99■□□□□ 0.15
SGCE-206ENST00000445866 SERPINB7O75635 380 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 KDELR2P33947 212 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 POLE2P56282 527 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 ARG2P78540 354 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 BNIP2Q12982 314 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 GRAMD1BQ3KR37 738 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 SLC22A10Q63ZE4 541 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 SPINK14Q6IE38 97 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 ZNF771Q7L3S4 317 aaPredicted RBP15.99■□□□□ 0.15
SGCE-206ENST00000445866 PATL1Q86TB9 770 aaKnown RBP15.99■□□□□ 0.15
SGCE-206ENST00000445866 GPALPP1Q8IXQ4 340 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 PEX5LQ8IYB4 626 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 SPPL2AQ8TCT8 520 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 HGDQ93099 445 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 QRSL1Q9H0R6 528 aaKnown RBP15.99■□□□□ 0.15
SGCE-206ENST00000445866 CACYBPQ9HB71 228 aaKnown RBP15.99■□□□□ 0.15
SGCE-206ENST00000445866 FLRT3Q9NZU0 649 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 PCDHGA9Q9Y5G4 932 aaKnown RBP15.99■□□□□ 0.15
SGCE-206ENST00000445866 CDK2AP1O14519 115 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 ETS2P15036 469 aa15.99■□□□□ 0.15
SGCE-206ENST00000445866 GGT1P19440 569 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms