RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 FAM120BQ96EK7 910 aaKnown RBP19.14■□□□□ 0.65
CDKN3-204ENST00000442975 GIMAP5Q96F15 307 aa19.14■□□□□ 0.65
CDKN3-204ENST00000442975 C16orf58Q96GQ5 468 aa19.14■□□□□ 0.65
CDKN3-204ENST00000442975 WDYHV1Q96HA8 205 aa19.14■□□□□ 0.65
CDKN3-204ENST00000442975 NUF2Q9BZD4 464 aa19.14■□□□□ 0.65
CDKN3-204ENST00000442975 TRIM8Q9BZR9 551 aa19.14■□□□□ 0.65
CDKN3-204ENST00000442975 AKTIPQ9H8T0 292 aa19.14■□□□□ 0.65
CDKN3-204ENST00000442975 SIRT3Q9NTG7 399 aaPredicted RBP19.14■□□□□ 0.65
CDKN3-204ENST00000442975 B4DXG7 233 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 GMFGO60234 142 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 FADS1O60427 444 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 NKX2-2O95096 273 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 C6orf47O95873 294 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 ALOX5P09917 674 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 SOAT1P35610 550 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 PRIM2P49643 509 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 MAGOHP61326 146 aaKnown RBP19.13■□□□□ 0.65
CDKN3-204ENST00000442975 EMX2Q04743 252 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 TP53BP2Q13625 1128 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 RCAN2Q14206 197 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 LASP1Q14847 261 aaKnown RBP19.13■□□□□ 0.65
CDKN3-204ENST00000442975 MLC1Q15049 377 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 PGS1Q32NB8 556 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 BEND6Q5SZJ8 279 aaPredicted RBP19.13■□□□□ 0.65
CDKN3-204ENST00000442975 RAET1LQ5VY80 246 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 AAGABQ6PD74 315 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 FIGNL1Q6PIW4 674 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 ENPP6Q6UWR7 440 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 MARCH3Q86UD3 253 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 LIX1LQ8IVB5 337 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 TRIM42Q8IWZ5 723 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 SLC16A11Q8NCK7 471 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 OR5P2Q8WZ92 322 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 SPOCK3Q9BQ16 436 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 DSN1Q9H410 356 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 SDHAF3Q9NRP4 125 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 NTMQ9P121 344 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.13■□□□□ 0.65
CDKN3-204ENST00000442975 ABCA12Q86UK0 2595 aa19.13■□□□□ 0.65
CDKN3-204ENST00000442975 NCKAP5O14513 1909 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 HSPB2A8KAH6 182 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 CFLARO15519 480 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 BMP5P22003 454 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 DIO3P55073 304 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 TFF3Q07654 80 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 SF3B4Q15427 424 aaKnown RBP eCLIP19.12■□□□□ 0.65
CDKN3-204ENST00000442975 HSPB2Q16082 182 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 GRAMD1BQ3KR37 738 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 KIRREL3Q8IZU9 778 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 TNIP2Q8NFZ5 429 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 DUSP26Q9BV47 211 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 RTN4RQ9BZR6 473 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 BHLHE41Q9C0J9 482 aaPredicted RBP19.12■□□□□ 0.65
CDKN3-204ENST00000442975 CXorf36Q9H7Y0 433 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 NEUROD4Q9HD90 331 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 PNPOQ9NVS9 261 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 ASIC5Q9NY37 505 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 NKIRAS1Q9NYS0 192 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 MED11Q9P086 117 aa19.12■□□□□ 0.65
CDKN3-204ENST00000442975 EPPINO95925 133 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 HMGN2P05204 90 aaKnown RBP19.11■□□□□ 0.65
CDKN3-204ENST00000442975 HK1P19367 917 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 MSX1P28360 303 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 STARP49675 285 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 GFRA1P56159 465 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 DSCR4P56555 118 aaPredicted RBP19.11■□□□□ 0.65
CDKN3-204ENST00000442975 WDR4P57081 412 aaKnown RBP19.11■□□□□ 0.65
CDKN3-204ENST00000442975 SLC25A35Q3KQZ1 300 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 LSM12Q3MHD2 195 aaKnown RBP19.11■□□□□ 0.65
CDKN3-204ENST00000442975 CCNJQ5T5M9 372 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 NSUN5P2Q63ZY6 315 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 RIMKLAQ8IXN7 391 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 NATD1Q8N6N6 113 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 FADS6Q8N9I5 356 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 GATSQ8NAP1 163 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 NAXEQ8NCW5 288 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 OR2M3Q8NG83 312 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 OR56A1Q8NGH5 318 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 OR5AK3PQ8NH89 298 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 HOXB13Q92826 284 aaPredicted RBP19.11■□□□□ 0.65
CDKN3-204ENST00000442975 COQ8BQ96D53 544 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 MARCOQ9UEW3 520 aaPredicted RBP19.11■□□□□ 0.65
CDKN3-204ENST00000442975 NINQ8N4C6 2090 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 CSMD1Q96PZ7 3565 aa19.11■□□□□ 0.65
CDKN3-204ENST00000442975 FBN2P35556 2912 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 KCNK2O95069 426 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 ANGPTL1O95841 491 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 IL2RAP01589 272 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 MAP3K8P41279 467 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 CCT3P49368 545 aaKnown RBP19.1■□□□□ 0.65
CDKN3-204ENST00000442975 CLDN8P56748 225 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 DUSP19Q8WTR2 217 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 CDS1Q92903 461 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 TUBA1CQ9BQE3 449 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 ENKD1Q9H0I2 346 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 PTGES2Q9H7Z7 377 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 HAO1Q9UJM8 370 aa19.1■□□□□ 0.65
CDKN3-204ENST00000442975 FAF1Q9UNN5 650 aaPredicted RBP19.1■□□□□ 0.65
CDKN3-204ENST00000442975 CD8B2A6NJW9 211 aa19.09■□□□□ 0.65
CDKN3-204ENST00000442975 DVL2O14641 736 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms