RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PID1Q7Z2X4 250 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 ARHGAP22Q7Z5H3 698 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SFR1Q86XK3 245 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PTOV1Q86YD1 416 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CROCCP3Q8IVE0 287 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CMTM8Q8IZV2 173 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GPC2Q8N158 579 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 TBC1D19Q8N5T2 526 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PCDH20Q8N6Y1 951 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 C12orf76Q8N812 135 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 TTC29Q8NA56 475 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR5AU1Q8NGC0 362 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR4D5Q8NGN0 318 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 NUBPLQ8TB37 319 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PHF21AQ96BD5 680 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC25A36Q96CQ1 311 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 C10orf35Q96D05 121 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 RNF183Q96D59 192 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 C12orf42Q96LP6 360 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 C9orf72Q96LT7 481 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 DEFB118Q96PH6 123 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 NDNQ99608 321 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC30A2Q9BRI3 323 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 DPH7Q9BTV6 452 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 DUSP16Q9BY84 665 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM39BQ9GZU3 492 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 TOLLIPQ9H0E2 274 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 GANQ9H2C0 597 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 ESRP2Q9H6T0 727 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 VIPAS39Q9H9C1 493 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 C12orf10Q9HB07 376 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 POLE4Q9NR33 117 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 LYARQ9NX58 379 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 STMN3Q9NZ72 180 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 POLKQ9UBT6 870 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC9A2Q9UBY0 812 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 TUBGCP4Q9UGJ1 667 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 WARS2Q9UGM6 360 aaKnown RBP3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 FZD4Q9ULV1 537 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 MEMO1Q9Y316 297 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 WDR45Q9Y484 360 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 CACNG2Q9Y698 323 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 URGCP-MRPS24S4R325 110 aa3.29□□□□□ -1.88
HMGB1P12-201ENST00000438594 PPIAL4CA0A0B4J2A2 164 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRSS51A0A1B0GVH4 220 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 A0A1W2PPC1 479 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SH3PXD2BA1X283 911 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMCO2A6NFE2 343 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ARGFXA6NJG6 315 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRRC30A6NM36 301 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ARHGEF33A8MVX0 844 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRRN3E7EW58 273 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMIM22K7EJ46 135 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYB561D2O14569 222 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 AIM2O14862 343 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LIN7AO14910 233 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 DENRO43583 198 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 GATCO43716 136 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC28A2O43868 658 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR2J3O76001 311 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 NOL4O94818 638 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 VAPBO95292 243 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 HPRP00739 348 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 EPOP01588 193 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 GPIP06744 558 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 FABP1P07148 127 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ANXA5P08758 320 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 OCMP0CE72 109 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC35E2BP0CK96 405 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC35E2P0CK97 266 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 RD3LP0DJH9 198 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMIM18P0DKX4 95 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PPIAL4GP0DN37 164 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PPP3CBP16298 524 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 GOT1P17174 413 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CTRB1P17538 263 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 MSH3P20585 1137 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CMA1P23946 247 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 G0S2P27469 103 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CERS1P27544 350 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CD82P27701 267 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SRD5A2P31213 254 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CEACAM3P40198 252 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CRYBB2P43320 205 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 GPR12P47775 334 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACLYP53396 1101 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CEBPGP53567 150 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PGGT1BP53609 377 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PLA2G16P53816 162 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ATP1B3P54709 279 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 HMGCS2P54868 508 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PSMD4P55036 377 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 UCNP55089 124 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 NUP107P57740 925 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 MLF1P58340 268 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SUMO2P61956 95 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 HERVK_113P63132 956 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ERVK-25P63136 954 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 NAAAQ02083 359 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SULT2A1Q06520 285 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms