RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 PCYT1AP49585 367 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 HNRNPH2P55795 449 aaKnown RBP12.73□□□□□ -0.37
LINC01088-201ENST00000437737 SIRPAP78324 504 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
LINC01088-201ENST00000437737 CLEC12BQ2HXU8 276 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 KHDRBS2Q5VWX1 349 aaKnown RBP12.73□□□□□ -0.37
LINC01088-201ENST00000437737 OR2A2Q6IF42 318 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 SLC30A6Q6NXT4 461 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 VWA1Q6PCB0 445 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
LINC01088-201ENST00000437737 RPS27LQ71UM5 84 aaKnown RBP12.73□□□□□ -0.37
LINC01088-201ENST00000437737 HIPK1Q86Z02 1210 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 CCDC197Q8NCU1 140 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 OR4F6Q8NGB9 312 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 REPS1Q96D71 796 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 STARD4Q96DR4 205 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 CMTM7Q96FZ5 175 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 CENPKQ9BS16 269 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 OR2B2Q9GZK3 357 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 OR51B5Q9H339 312 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 ZNF701Q9NV72 531 aaPredicted RBP12.73□□□□□ -0.37
LINC01088-201ENST00000437737 PNPOQ9NVS9 261 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 ELOVL5Q9NYP7 299 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 KLRF1Q9NZS2 232 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 ADGRE2Q9UHX3 823 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 CUBNO60494 3623 aa12.73□□□□□ -0.37
LINC01088-201ENST00000437737 ABCA1O95477 2261 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 WASHC1A8K0Z3 465 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 HAX1O00165 279 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 PHF1O43189 567 aaPredicted RBP12.72□□□□□ -0.37
LINC01088-201ENST00000437737 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
LINC01088-201ENST00000437737 CBR3O75828 277 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 OR4F21O95013 312 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 CRHP06850 196 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 ABCB1P08183 1280 aaPredicted RBP12.72□□□□□ -0.37
LINC01088-201ENST00000437737 NR2F6P10588 404 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 ABCD3P28288 659 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 LOXP28300 417 aaPredicted RBP12.72□□□□□ -0.37
LINC01088-201ENST00000437737 GALNSP34059 522 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 ARFIP2P53365 341 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 TRAF3Q13114 568 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 DDX39BQ13838 428 aaKnown RBP12.72□□□□□ -0.37
LINC01088-201ENST00000437737 NNATQ16517 81 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 CHRFAM7AQ494W8 412 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 KANK2Q63ZY3 851 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 MED27Q6P2C8 311 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 AAGABQ6PD74 315 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 RNF165Q6ZSG1 346 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 CHMP1BQ7LBR1 199 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 BTLAQ7Z6A9 289 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 MYLK4Q86YV6 388 aaPredicted RBP12.72□□□□□ -0.37
LINC01088-201ENST00000437737 GALNT12Q8IXK2 581 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 OR52B6Q8NGF0 335 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 AGR3Q8TD06 166 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 RGMAQ96B86 450 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 CTHRC1Q96CG8 243 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 MARK4Q96L34 752 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 SHCBP1LQ9BZQ2 653 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 OR10A5Q9H207 317 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 GALNT9Q9HCQ5 603 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 MRGBPQ9NV56 204 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 MARCOQ9UEW3 520 aaPredicted RBP12.72□□□□□ -0.37
LINC01088-201ENST00000437737 DLGAP4Q9Y2H0 992 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 ARL2BPQ9Y2Y0 163 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 PCDHGA11Q9Y5H2 935 aa12.72□□□□□ -0.37
LINC01088-201ENST00000437737 ROS1P08922 2347 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 A0A0G2JND7 137 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 PPP6CO00743 305 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 TMCC2O75069 709 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 ICOSLGO75144 302 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 ULK1O75385 1050 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 PPM1BO75688 479 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 SOX30O94993 753 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 SLC35E2P0CK97 266 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 EPORP19235 508 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 SERPINB1P30740 379 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 LHX2P50458 406 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 AQP5P55064 265 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 GFRA1P56159 465 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 PHEXP78562 749 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 IFT88Q13099 833 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 E2F2Q14209 437 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 BEX5Q5H9J7 111 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 DEPDC1Q5TB30 811 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 C6orf163Q5TEZ5 329 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 ANKRD34AQ69YU3 496 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 DESI1Q6ICB0 168 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 GRHL2Q6ISB3 625 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 LETMD1Q6P1Q0 360 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 ZNF704Q6ZNC4 412 aaPredicted RBP12.71□□□□□ -0.37
LINC01088-201ENST00000437737 LAS2Q8IYD9 372 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 ZCCHC7Q8N3Z6 543 aaKnown RBP12.71□□□□□ -0.37
LINC01088-201ENST00000437737 RNF175Q8N4F7 328 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 CDYL2Q8N8U2 506 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 ADIPOR1Q96A54 375 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 ZNF845Q96IR2 970 aaPredicted RBP12.71□□□□□ -0.37
LINC01088-201ENST00000437737 SFXN2Q96NB2 322 aa12.71□□□□□ -0.37
LINC01088-201ENST00000437737 NODALQ96S42 347 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms