RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 OR10T2Q8NGX3 314 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 NANPQ8TBE9 248 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 GIPC3Q8TF64 312 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 SLC5A11Q8WWX8 675 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 OSTF1Q92882 214 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RBM18Q96H35 190 aaKnown RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 C18orf12Q96KH6 178 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 C4orf36Q96KX1 117 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 VPS35Q96QK1 796 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 TXN2Q99757 166 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CABLES2Q9BTV7 478 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 LRRC61Q9BV99 259 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 GFRA4Q9GZZ7 299 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RIBC2Q9H4K1 309 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RPAP3Q9H6T3 665 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 GTSE1Q9NYZ3 720 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 KLRF1Q9NZS2 232 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 EIF3KQ9UBQ5 218 aaKnown RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 EXTL2Q9UBQ6 330 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 GHRLQ9UBU3 117 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CHRNA9Q9UGM1 479 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 ATP6V1HQ9UI12 483 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 DHRS7Q9Y394 339 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 EXOSC1Q9Y3B2 195 aaKnown RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 MAB21L2Q9Y586 359 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 UTRNP46939 3433 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 SLIT2O94813 1529 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CCDC141Q6ZP82 1450 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RALGAPA1Q6GYQ0 2036 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CDC42BPBQ9Y5S2 1711 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 KDM5AP29375 1690 aaKnown RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 ARHGEF10O15013 1369 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 INO80Q9ULG1 1556 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 A8MXK9 166 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 EI24O14681 340 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 MAPK13O15264 365 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 CFLARO15519 480 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TYROBPO43914 113 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TBX19O60806 448 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 SDC3O75056 442 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 ASNSP08243 561 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 GSTA1P08263 222 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 WNT2P09544 360 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 RNF224P0DH78 156 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 KRT13P13646 458 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TNNI3P19429 210 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 PAICSP22234 425 aaKnown RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 STK19P49842 368 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 ACY1Q03154 408 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 SRYQ05066 204 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 HYAL1Q12794 435 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TRIP10Q15642 601 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TMEM52BQ4KMG9 183 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 FAM219BQ5XKK7 198 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 PRR5LQ6MZQ0 368 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 DOK6Q6PKX4 331 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 LPCAT2Q7L5N7 544 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 P4HA3Q7Z4N8 544 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 EFCAB13Q8IY85 973 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF440Q8IYI8 595 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 FGFRL1Q8N441 504 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 DENND6BQ8NEG7 585 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 BEST4Q8NFU0 473 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 CRYGNQ8WXF5 182 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF689Q96CS4 500 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 VPS39Q96JC1 886 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF597Q96LX8 424 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF599Q96NL3 588 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 FEM1AQ9BSK4 669 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 CHCHD5Q9BSY4 110 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TBCDQ9BTW9 1192 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 RPP25Q9BUL9 199 aaKnown RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TBC1D10AQ9BXI6 508 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 TRIM9Q9C026 710 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 POLR1EQ9GZS1 481 aaKnown RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 NT5C3AQ9H0P0 336 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 AMBNQ9NP70 447 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 DCAF13Q9NV06 445 aaKnown RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 GDAP2Q9NXN4 497 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 GALPQ9UBC7 116 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 SEC14L4Q9UDX3 406 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 EIF3LQ9Y262 564 aaKnown RBP2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 KIF3AQ9Y496 699 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 FKBP7Q9Y680 259 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 HCFC1P51610 2035 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 UBR1Q8IWV7 1749 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 MYOM2P54296 1465 aa2.5□□□□□ -2.01
HMGB1P27-201ENST00000431429 DHX57Q6P158 1386 aaKnown RBP2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 XIRP1Q702N8 1843 aaKnown RBP2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 SPHKAPQ2M3C7 1700 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 TEX48A0A1B0GUV7 120 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 MFSD2BA6NFX1 497 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 RPL37AP8A6NKH3 93 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 PDHXO00330 501 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 XPO1O14980 1071 aaKnown RBP2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 MCF2LO15068 1137 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 PI15O43692 258 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 NEBLO76041 1014 aa2.49□□□□□ -2.01
HMGB1P27-201ENST00000431429 UFL1O94874 794 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms