RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 ESRRBO95718 433 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 IL33O95760 270 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 IGKV1D-16P01601 117 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 DDCP20711 480 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 IL11P20809 199 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 MAP3K8P41279 467 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 SLC6A8P48029 635 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 EEFSECP57772 596 aaKnown RBP13.45□□□□□ -0.26
ATG4B-209ENST00000425239 SIRPAP78324 504 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 GANABQ14697 944 aaKnown RBP13.45□□□□□ -0.26
ATG4B-209ENST00000425239 PON3Q15166 354 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 ERCC6LQ2NKX8 1250 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 SPIN4Q56A73 249 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 ANKRD34AQ69YU3 496 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 FAM71E1Q6IPT2 247 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 C20orf204Q6ZNR8 217 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 SH2D5Q6ZV89 423 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 FAM214BQ7L5A3 538 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 MARCH3Q86UD3 253 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 HOXB13Q92826 284 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-209ENST00000425239 PERPQ96FX8 193 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 KCNA7Q96RP8 456 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 CCL19Q99731 98 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 NPAS1Q99742 590 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 SLC39A3Q9BRY0 314 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 BDH2Q9BUT1 245 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 ZNF701Q9NV72 531 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-209ENST00000425239 FAM120CQ9NX05 1096 aaKnown RBP13.45□□□□□ -0.26
ATG4B-209ENST00000425239 ABCG2Q9UNQ0 655 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 TIMM22Q9Y584 194 aa13.45□□□□□ -0.26
ATG4B-209ENST00000425239 USF3Q68DE3 2245 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 GNG14A0A1W2PPG7 69 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 POC1B-GALNT4F8VUJ3 575 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 UBFD1O14562 309 aaKnown RBP13.44□□□□□ -0.26
ATG4B-209ENST00000425239 JUNP05412 331 aaKnown RBP13.44□□□□□ -0.26
ATG4B-209ENST00000425239 NID1P14543 1247 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 TBXA2RP21731 343 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 PSMA4P25789 261 aaKnown RBP13.44□□□□□ -0.26
ATG4B-209ENST00000425239 KRT20P35900 424 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 PTH2RP49190 550 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 PRKAA2P54646 552 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 FOXA1P55317 472 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 MRPS22P82650 360 aaKnown RBP13.44□□□□□ -0.26
ATG4B-209ENST00000425239 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 ACSM2AQ08AH3 577 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 RAET1LQ5VY80 246 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 ACSM2BQ68CK6 577 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 C8orf74Q6P047 294 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 GPRIN3Q6ZVF9 776 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 CHMP1BQ7LBR1 199 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 FAM9CQ8IZT9 166 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 ELP4Q96EB1 424 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 L3HYPDHQ96EM0 354 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 DTNBP1Q96EV8 351 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 ADGRG7Q96K78 797 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 TMEM204Q9BSN7 226 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 LMF2Q9BU23 707 aaKnown RBP13.44□□□□□ -0.26
ATG4B-209ENST00000425239 GLIPR2Q9H4G4 154 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 PFDN4Q9NQP4 134 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 OR10H1Q9Y4A9 318 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 AP4B1Q9Y6B7 739 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 ATRQ13535 2644 aa13.44□□□□□ -0.26
ATG4B-209ENST00000425239 SHISA8B8ZZ34 492 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 INAFM1C9JVW0 142 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 H3BML4 177 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 SMAD7O15105 426 aaKnown RBP13.43□□□□□ -0.26
ATG4B-209ENST00000425239 SEC14L5O43304 696 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 SOX30O94993 753 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 CNOT4O95628 575 aaKnown RBP13.43□□□□□ -0.26
ATG4B-209ENST00000425239 PLAUP00749 431 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 SNRPAP09012 282 aaKnown RBP13.43□□□□□ -0.26
ATG4B-209ENST00000425239 ANXA4P09525 319 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-209ENST00000425239 PCSK6P29122 969 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 GSTM5P46439 218 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 PRR5P85299 388 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 C2orf80Q0P641 193 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 CTU2Q2VPK5 515 aaKnown RBP13.43□□□□□ -0.26
ATG4B-209ENST00000425239 TMEM107Q6UX40 140 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 STAC2Q6ZMT1 411 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 ZC3HAV1LQ96H79 300 aaKnown RBP13.43□□□□□ -0.26
ATG4B-209ENST00000425239 AMDHD1Q96NU7 426 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 EBPLQ9BY08 206 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 SHCBP1LQ9BZQ2 653 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 GSTO2Q9H4Y5 243 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 SDHAF3Q9NRP4 125 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 GRID1Q9ULK0 1009 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 CCL27Q9Y4X3 112 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 RTTNQ86VV8 2226 aa13.43□□□□□ -0.26
ATG4B-209ENST00000425239 MXRA5Q9NR99 2828 aa13.42□□□□□ -0.26
ATG4B-209ENST00000425239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-209ENST00000425239 GXYLT2A0PJZ3 443 aa13.42□□□□□ -0.26
ATG4B-209ENST00000425239 SLITRK5O94991 958 aa13.42□□□□□ -0.26
ATG4B-209ENST00000425239 NCBP2P52298 156 aaKnown RBP eCLIP13.42□□□□□ -0.262e-8■■■■■ 28.7
ATG4B-209ENST00000425239 BTKQ06187 659 aa13.42□□□□□ -0.26
ATG4B-209ENST00000425239 LCP2Q13094 533 aa13.42□□□□□ -0.26
ATG4B-209ENST00000425239 STX5Q13190 355 aa13.42□□□□□ -0.26
ATG4B-209ENST00000425239 FGFBP1Q14512 234 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms