RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TDP1Q9NUW8 608 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 BABAM2Q9NXR7 383 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 CALML5Q9NZT1 146 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 STON1Q9Y6Q2 735 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 FEZF1A0PJY2 475 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 MAN2B1O00754 1011 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 LILRB3O75022 631 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 CLEC3AO75596 197 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 CH25HO95992 272 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 RPN2P04844 631 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 HMGN2P05204 90 aaKnown RBP16.5■□□□□ 0.23
SDCBP-202ENST00000413219 EIF4EP06730 217 aaKnown RBP16.5■□□□□ 0.23
SDCBP-202ENST00000413219 TFPIP10646 304 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 POU3F3P20264 500 aaPredicted RBP16.5■□□□□ 0.23
SDCBP-202ENST00000413219 THBS2P35442 1172 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 LASP1Q14847 261 aaKnown RBP16.5■□□□□ 0.23
SDCBP-202ENST00000413219 TRAM1Q15629 374 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 ASB18Q6ZVZ8 466 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 HMGN2P46Q86SG4 172 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 LUZP2Q86TE4 346 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 ACBD7Q8N6N7 88 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 TOR1AIP2Q8NFQ8 470 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 HGDQ93099 445 aa16.5■□□□□ 0.23
SDCBP-202ENST00000413219 PPIL3Q9H2H8 161 aaKnown RBP16.5■□□□□ 0.23
SDCBP-202ENST00000413219 CPSF4LA6NMK7 179 aaKnown RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 TSC22D2O75157 780 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 PRKAG1P54619 331 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 RGS1Q08116 209 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 LY6G5CQ5SRR4 150 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 ZNF655Q8N720 491 aaPredicted RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 AMER3Q8N944 861 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 BBS1Q8NFJ9 593 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 OR2T33Q8NG76 320 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 OR11H7Q8NGC8 314 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 OTUB1Q96FW1 271 aaPredicted RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 AHCYL2Q96HN2 611 aaKnown RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 SLC38A1Q9H2H9 487 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 SLCO1C1Q9NYB5 712 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 MAT2BQ9NZL9 334 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 COPZ2Q9P299 210 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 ENTPD4Q9Y227 616 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 MYOFQ9NZM1 2061 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 SCN5AQ14524 2016 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 H7BY64 318 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 BTN3A3O00478 584 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 KPNA3O00505 521 aaPredicted RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 OR1F1O43749 312 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 PDGFAP04085 211 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 PEPDP12955 493 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 SSR2P43308 183 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 RAG2P55895 527 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 MBOAT2Q6ZWT7 520 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 CXXC5Q7LFL8 322 aaKnown RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 HDDC2Q7Z4H3 204 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 SIRT6Q8N6T7 355 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 SAMD12Q8N8I0 201 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 OR5K2Q8NHB8 316 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 PRAP1Q96NZ9 151 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 YIPF4Q9BSR8 244 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 LINC00597Q9H2U6 94 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 OR51J1Q9H342 316 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 HINT3Q9NQE9 182 aaKnown RBP16.49■□□□□ 0.23
SDCBP-202ENST00000413219 KLHL28Q9NXS3 571 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 KLF15Q9UIH9 416 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 SPEF1Q9Y4P9 236 aa16.49■□□□□ 0.23
SDCBP-202ENST00000413219 A0A1B0GVI7 797 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 OR5K3A6NET4 321 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 SOCS6O14544 535 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 LAG3P18627 525 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 NDUFV2P19404 249 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 TMEM35AQ53FP2 167 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 PIP5KL1Q5T9C9 394 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 ADCK2Q7Z695 626 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 GPR135Q8IZ08 494 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 CXorf40AQ8TE69 158 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 SORCS2Q96PQ0 1159 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 FN3KQ9H479 309 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 HEXA-AS1Q9H8Q6 139 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 TRIM36Q9NQ86 728 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 NUDT15Q9NV35 164 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 NLGN3Q9NZ94 848 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 ZNF222Q9UK12 451 aa16.48■□□□□ 0.23
SDCBP-202ENST00000413219 GPR55Q9Y2T6 319 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-202ENST00000413219 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.48■□□□□ 0.23
SDCBP-202ENST00000413219 DVL2O14641 736 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 EEF1E1O43324 174 aaKnown RBP16.47■□□□□ 0.23
SDCBP-202ENST00000413219 SOX30O94993 753 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 OR5F1O95221 314 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 PRNPP04156 253 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 C8AP07357 584 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 ALPPL2P10696 532 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 PRKAR1BP31321 381 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 SFXN4Q6P4A7 337 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 B3GLCTQ6Y288 498 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 CPOQ8IVL8 374 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 TIGD4Q8IY51 512 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 CLIP3Q96DZ5 547 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 FCRL4Q96PJ5 515 aa16.47■□□□□ 0.23
SDCBP-202ENST00000413219 ALG8Q9BVK2 526 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms