RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 BICRALQ6AI39 1079 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 RPUSD3Q6P087 351 aaKnown RBP26.91■■□□□ 1.9
USP42-202ENST00000404008 HACD2Q6Y1H2 254 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 SULF2Q8IWU5 870 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 OR8J3Q8NGG0 315 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 THUMPD3Q9BV44 507 aaKnown RBP26.91■■□□□ 1.9
USP42-202ENST00000404008 ZNF350Q9GZX5 532 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 PROK2Q9HC23 129 aa26.91■■□□□ 1.9
USP42-202ENST00000404008 A0A0G2JMM0 328 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 A0A1W2PPB8 328 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 A0A1W2PRS3 328 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 KIR3DP1A8MWS1 328 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 UTS2O95399 124 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 ATP6V1C1P21283 382 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 CNR1P21554 472 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 CPA2P48052 419 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 NFATC3Q12968 1075 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 SYPL1Q16563 259 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 COLEC12Q5KU26 742 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 TRPM8Q7Z2W7 1104 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 GPATCH1Q9BRR8 931 aaKnown RBP26.9■■□□□ 1.9
USP42-202ENST00000404008 ANGPTL4Q9BY76 406 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 METTL7AQ9H8H3 244 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 P2RX2Q9UBL9 471 aa26.9■■□□□ 1.9
USP42-202ENST00000404008 PRAMEF25A6NGN4 478 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 G3V3Y1 287 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 PEX1O43933 1283 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 STX11O75558 287 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 SORBS2O94875 1100 aaKnown RBP26.89■■□□□ 1.9
USP42-202ENST00000404008 GUSBP08236 651 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 NUDT7P0C024 238 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 TFPTP0C1Z6 253 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 EVI2BP34910 448 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 GPR85P60893 370 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 SNTA1Q13424 505 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 ART3Q13508 389 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 MAPK11Q15759 364 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 GRAMD1BQ3KR37 738 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 GPAT3Q53EU6 434 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 TBCELQ5QJ74 424 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 C8orf82Q6P1X6 216 aaPredicted RBP26.89■■□□□ 1.9
USP42-202ENST00000404008 ANKFN1Q8N957 763 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 GRHL3Q8TE85 626 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 NTNG2Q96CW9 530 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 TRNT1Q96Q11 434 aaKnown RBP26.89■■□□□ 1.9
USP42-202ENST00000404008 SH3GL1Q99961 368 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 KAT8Q9H7Z6 458 aaKnown RBP26.89■■□□□ 1.9
USP42-202ENST00000404008 ABCG2Q9UNQ0 655 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 CFAP46Q8IYW2 2715 aa26.89■■□□□ 1.9
USP42-202ENST00000404008 KLRC4-KLRK1H3BQV0 150 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 FADS1O60427 444 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 FCMRO60667 390 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 ZIC2O95409 532 aaPredicted RBP26.88■■□□□ 1.89
USP42-202ENST00000404008 CBX6O95503 412 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 SLC6A2P23975 617 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 PTGDSP41222 190 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 CBX1P83916 185 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 FLYWCH1Q4VC44 716 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 RABL3Q5HYI8 236 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 AP1ARQ63HQ0 302 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 OLIG3Q7RTU3 272 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 OR2M7Q8NG81 312 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 OR4C3Q8NH37 302 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 SLC38A5Q8WUX1 472 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 A4GALTQ9NPC4 353 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 POLE3Q9NRF9 147 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 UBQLN4Q9NRR5 601 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 KLRF1Q9NZS2 232 aa26.88■■□□□ 1.89
USP42-202ENST00000404008 H6PDO95479 791 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 NGFRP08138 427 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 CHRM4P08173 479 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 NR2F1P10589 423 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 TBXA2RP21731 343 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 INAQ16352 499 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 GCNT6Q5T4J0 391 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 TYW3Q6IPR3 259 aaKnown RBP26.87■■□□□ 1.89
USP42-202ENST00000404008 PNPLA5Q7Z6Z6 429 aaPredicted RBP26.87■■□□□ 1.89
USP42-202ENST00000404008 MAL2Q969L2 176 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 HOPXQ9BPY8 73 aaPredicted RBP26.87■■□□□ 1.89
USP42-202ENST00000404008 FAM173AQ9BQD7 235 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 OSBPL11Q9BXB4 747 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 ANAPC2Q9UJX6 822 aa26.87■■□□□ 1.89
USP42-202ENST00000404008 NINQ8N4C6 2090 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 PINLYPA6NC86 204 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 NPIPB9F8W1W9 429 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 SLC28A2O43868 658 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 DNASE1L1P49184 302 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 MEOX1P50221 254 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 KCNJ2P63252 427 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 HPCAP84074 193 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 ADRM1Q16186 407 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 SOWAHCQ53LP3 525 aaPredicted RBP26.86■■□□□ 1.89
USP42-202ENST00000404008 SLC30A6Q6NXT4 461 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 FRRS1Q6ZNA5 592 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 POGLUT1Q8NBL1 392 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 NSL1Q96IY1 281 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 DOHHQ9BU89 302 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 HOXD1Q9GZZ0 328 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 SAP130Q9H0E3 1048 aa26.86■■□□□ 1.89
USP42-202ENST00000404008 RUBCNLQ9H714 662 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms