RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 A0A1W2PRB8 838 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 EEF1E1-BLOC1S5C9J1V9 151 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 LINC01387J3KSC0 135 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 EEF1E1O43324 174 aaKnown RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 FADS1O60427 444 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 SKAP2O75563 359 aaPredicted RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 UTS2O95399 124 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ALOX5P09917 674 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 MYZAPP0CAP1 466 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 TMIGD3P0DMS9 266 aaPredicted RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 HPGDP15428 266 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 CREB1P16220 341 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 HK1P19367 917 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 SERPINB4P48594 390 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 PRIM2P49643 509 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 EEFSECP57772 596 aaKnown RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 EEF1A1P68104 462 aaKnown RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF844Q08AG5 666 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 C17orf67Q0P5P2 114 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 MAD2L1Q13257 205 aaPredicted RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 BCL2A1Q16548 175 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF385BQ569K4 471 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 CPTPQ5TA50 214 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 EEF1A1P5Q5VTE0 462 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 RAET1LQ5VY80 246 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ZCCHC12Q6PEW1 402 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 CDH24Q86UP0 819 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 KIF18BQ86Y91 864 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 MEIOBQ8N635 442 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 GOT1L1Q8NHS2 421 aaPredicted RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 DUSP19Q8WTR2 217 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 RNF138Q8WVD3 245 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 PIK3R3Q92569 461 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 JADE3Q92613 823 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 RNASE6Q93091 150 aaKnown RBP12.47□□□□□ -0.41
CXCL12-205ENST00000395794 WNT2BQ93097 391 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 TUBGCP3Q96CW5 907 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 CHMP6Q96FZ7 201 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 MED11Q9P086 117 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ATP6V1HQ9UI12 483 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ITGB1BP2Q9UKP3 347 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 SNX8Q9Y5X2 465 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 DNAJC13O75165 2243 aa12.47□□□□□ -0.41
CXCL12-205ENST00000395794 ABCA12Q86UK0 2595 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 FBN2P35556 2912 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 GXYLT2A0PJZ3 443 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 WDR91A4D1P6 747 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 CLCA1A8K7I4 914 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 KDM4EB2RXH2 506 aaPredicted RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 SCAMP2O15127 329 aaKnown RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 TM9SF1O15321 606 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 BIRC5O15392 142 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 ZIC3O60481 467 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 NKX2-2O95096 273 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 SNUPNO95149 360 aaKnown RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 IL18BPO95998 194 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 PEPDP12955 493 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 POU3F2P20265 443 aaPredicted RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 FRKP42685 505 aaPredicted RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 STARP49675 285 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 LHX2P50458 406 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 ZNF136P52737 540 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 DLX5P56178 289 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 KRTAP10-9P60411 292 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 MLC1Q15049 377 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 LSM12Q3MHD2 195 aaKnown RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 SPDYE7PQ495Y7 208 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 XKR7Q5GH72 579 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 C6orf136Q5SQH8 315 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 CEP85LQ5SZL2 805 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 IL23RQ5VWK5 629 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 P4HA3Q7Z4N8 544 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 MARCH3Q86UD3 253 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 GRAMD2AQ8IUY3 354 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 KIRREL3Q8IZU9 778 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 FADS6Q8N9I5 356 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 C9orf106Q8NAJ2 232 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 RELL2Q8NC24 303 aaPredicted RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 OR2M3Q8NG83 312 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 OR6Y1Q8NGX8 325 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 G6PC3Q9BUM1 346 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 SFXN3Q9BWM7 321 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 SSU72Q9NP77 194 aaKnown RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 KCNK9Q9NPC2 374 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 ZCCHC3Q9NUD5 404 aaKnown RBP12.46□□□□□ -0.41
CXCL12-205ENST00000395794 FLRT3Q9NZU0 649 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 NTMQ9P121 344 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 STOML1Q9UBI4 398 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 GIMAP2Q9UG22 337 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
CXCL12-205ENST00000395794 NCKAP5O14513 1909 aa12.46□□□□□ -0.42
CXCL12-205ENST00000395794 DCHS2Q6V1P9 2916 aa12.45□□□□□ -0.42
CXCL12-205ENST00000395794 CACNA1CQ13936 2221 aa12.45□□□□□ -0.42
CXCL12-205ENST00000395794 NDUFB5O43674 189 aa12.45□□□□□ -0.42
CXCL12-205ENST00000395794 SOX30O94993 753 aa12.45□□□□□ -0.42
CXCL12-205ENST00000395794 RCBTB2O95199 551 aa12.45□□□□□ -0.42
CXCL12-205ENST00000395794 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms