RNA–Protein interactions for RNA: ENST00000369128.9

VPS45-201, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2 BASIC

Gene VPS45, Length 2,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-201ENST00000369128 CLIP3Q96DZ5 547 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 SENP5Q96HI0 755 aaPredicted RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 PRRC1Q96M27 445 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 PSD2Q9BQI7 771 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 GABARAPL3Q9BY60 117 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 MTHFD2LQ9H903 347 aaPredicted RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 AKIRIN1Q9H9L7 192 aaPredicted RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 BATF3Q9NR55 127 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 SRPK3Q9UPE1 567 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 MYRFQ9Y2G1 1151 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 HCN4Q9Y3Q4 1203 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 ORC6Q9Y5N6 252 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 EXPH5Q8NEV8 1989 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 TRIM64A6NGJ6 449 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 CPSF4LA6NMK7 179 aaKnown RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 CNOT3O75175 753 aaKnown RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 CCNB2O95067 398 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 GASTP01350 101 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 IGKV3-11P04433 115 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 TFAP2AP05549 437 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 ZNF883P0CG24 379 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 ZNF136P52737 540 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 ZFP36L1Q07352 338 aaKnown RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 NPRL3Q12980 569 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 MRPL2Q5T653 305 aaKnown RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 LCN10Q6JVE6 187 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 TTC33Q6PID6 262 aaPredicted RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 PEX5LQ8IYB4 626 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 C8orf59Q8N0T1 100 aaPredicted RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 ZNF555Q8NEP9 628 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 SLC2A12Q8TD20 617 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 SGCDQ92629 289 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 DIO2Q92813 273 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 OR8D2Q9GZM6 311 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 RARRES3Q9UL19 164 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 NDRG4Q9ULP0 352 aaKnown RBP8.37□□□□□ -1.07
VPS45-201ENST00000369128 PCDHGA5Q9Y5G8 931 aa8.37□□□□□ -1.07
VPS45-201ENST00000369128 MUC6Q6W4X9 2439 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 MPDZO75970 2070 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 IGLV3-12A0A075B6K2 115 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 A0A1W2PRQ8 180 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 CDHR4A6H8M9 788 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 ARRDC5A6NEK1 342 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 CDX4O14627 284 aaPredicted RBP8.36□□□□□ -1.07
VPS45-201ENST00000369128 ADAM11O75078 769 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 THBS1P07996 1170 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 CCL4P13236 92 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 NID1P14543 1247 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 ZNF28P17035 718 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 TNNI3P19429 210 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 AGXTP21549 392 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 GALNSP34059 522 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 RORAP35398 523 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 RGS8P57771 180 aaPredicted RBP8.36□□□□□ -1.07
VPS45-201ENST00000369128 DGCR6Q14129 220 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 NSDHLQ15738 373 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 MEP1AQ16819 746 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 NKAIN1Q4KMZ8 207 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 FLYWCH1Q4VC44 716 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 PDZK1Q5T2W1 519 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 RNF220Q5VTB9 566 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 FAAH2Q6GMR7 532 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 PODNL1Q6PEZ8 512 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 KLHL17Q6TDP4 642 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 THAP5Q7Z6K1 395 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 MORN4Q8NDC4 146 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 CNIH3Q8TBE1 160 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 STT3BQ8TCJ2 826 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 ADAMTS16Q8TE57 1224 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 ZNF721Q8TF20 911 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 UBE2FQ969M7 185 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 LOXL4Q96JB6 756 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 PHOX2BQ99453 314 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 PITX2Q99697 317 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 SLC7A5P2Q9GIP4 190 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 MKKSQ9NPJ1 570 aaPredicted RBP8.36□□□□□ -1.07
VPS45-201ENST00000369128 PAPOLBQ9NRJ5 636 aaKnown RBP8.36□□□□□ -1.07
VPS45-201ENST00000369128 SEMA4GQ9NTN9 838 aa8.36□□□□□ -1.07
VPS45-201ENST00000369128 IGHV3-20A0A0C4DH32 117 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 SH3PXD2BA1X283 911 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 PCNX2A6NKB5 2137 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 EFCAB7A8K855 629 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 GALR2O43603 387 aaPredicted RBP8.35□□□□□ -1.07
VPS45-201ENST00000369128 LDOC1O95751 146 aaPredicted RBP8.35□□□□□ -1.07
VPS45-201ENST00000369128 AK1P00568 194 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 GKN3PP0CG01 181 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 ANXA8P13928 327 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 PTNP21246 168 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 ACP1P24666 158 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 HTR2AP28223 471 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 DUSP3P51452 185 aaPredicted RBP8.35□□□□□ -1.07
VPS45-201ENST00000369128 CLDN6P56747 220 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 ZNHIT3Q15649 155 aaPredicted RBP8.35□□□□□ -1.07
VPS45-201ENST00000369128 ELAVL1Q15717 326 aaKnown RBP8.35□□□□□ -1.07
VPS45-201ENST00000369128 KCTD21Q4G0X4 260 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 ENTPD8Q5MY95 495 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 FAM69BQ5VUD6 431 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 AP1ARQ63HQ0 302 aa8.35□□□□□ -1.07
VPS45-201ENST00000369128 PGBD2Q6P3X8 592 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms