RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 MBOAT4Q96T53 435 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF559Q9BR84 538 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 ACTR10Q9NZ32 417 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 SERTAD3Q9UJW9 196 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 NPIPA1Q9UND3 350 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 SEC16AO15027 2179 aa15.38■□□□□ 0.05
SCAF1-201ENST00000360565 TRBV5-4A0A0C4DH59 114 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 SCO2O43819 266 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 PRKRAO75569 313 aaKnown RBP15.37■□□□□ 0.05
SCAF1-201ENST00000360565 SPARCP09486 303 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 ADH7P40394 386 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 CTBSQ01459 385 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 CNN2Q99439 309 aaKnown RBP15.37■□□□□ 0.05
SCAF1-201ENST00000360565 SERINC1Q9NRX5 453 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 KLRF1Q9NZS2 232 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 BRWD1Q9NSI6 2320 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 LOC100509620A0A075B734 347 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 SMAD9O15198 467 aaKnown RBP15.37■□□□□ 0.05
SCAF1-201ENST00000360565 ELOCQ15369 112 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 THOC7Q6I9Y2 204 aaKnown RBP15.37■□□□□ 0.05
SCAF1-201ENST00000360565 RIMKLAQ8IXN7 391 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 SEMA4FO95754 770 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF20P17024 532 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 SMCO1Q147U7 214 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 BCL7AQ4VC05 210 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 KLHL26Q53HC5 615 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 TMEM179BQ7Z7N9 219 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF683Q8IZ20 524 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 TM4SF18Q96CE8 201 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 IL21Q9HBE4 155 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 RLIMQ9NVW2 624 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 SPATA6Q9NWH7 488 aaPredicted RBP15.37■□□□□ 0.05
SCAF1-201ENST00000360565 MRPL15Q9P015 296 aaKnown RBP15.37■□□□□ 0.05
SCAF1-201ENST00000360565 MBD2Q9UBB5 411 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 ANKRD31Q8N7Z5 1873 aa15.37■□□□□ 0.05
SCAF1-201ENST00000360565 ZNF726A6NNF4 738 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 L7N2F9 121 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 NPC1O15118 1278 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 LYRM1O43325 122 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 LILRB3O75022 631 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 RDH16O75452 317 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 OR3A3P47888 321 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 OR3A2P47893 321 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 ENTPD8Q5MY95 495 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 USP53Q70EK8 1073 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 VWA5B2Q8N398 1253 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 ASB15Q8WXK1 588 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 NEURL3Q96EH8 262 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 OR52D1Q9H346 318 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 SDHAF3Q9NRP4 125 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 STARD5Q9NSY2 213 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 PCDHGA6Q9Y5G7 932 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 MICAL3Q7RTP6 2002 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 FAM171A2A8MVW0 826 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 GPR89AB7ZAQ6 455 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 GYPBP06028 91 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 GPR89BP0CG08 455 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 THEGLP0DJG4 465 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 POU4F2Q12837 409 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 MLLT11Q13015 90 aaPredicted RBP15.36■□□□□ 0.05
SCAF1-201ENST00000360565 TMEM69Q5SWH9 247 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 B3GLCTQ6Y288 498 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 BCDIN3DQ7Z5W3 292 aaKnown RBP15.36■□□□□ 0.05
SCAF1-201ENST00000360565 C12orf40Q86WS4 652 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 CCDC107Q8WV48 283 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 TIMM29Q9BSF4 260 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 EPHX3Q9H6B9 360 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 TMEM38AQ9H6F2 299 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 PRSS16Q9NQE7 514 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 RBM7Q9Y580 266 aaKnown RBP15.36■□□□□ 0.05
SCAF1-201ENST00000360565 A0A1B0GVC2 190 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 A6NIN4 97 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 PLPP1O14494 284 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 PRR35P0CG20 571 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 PRKCAP17252 672 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 CTGFP29279 349 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 ACTA2P62736 377 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 ACTG2P63267 376 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 KIR2DS3Q14952 304 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 EXOSC7Q15024 291 aaKnown RBP15.36■□□□□ 0.05
SCAF1-201ENST00000360565 TTLL10Q6ZVT0 673 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 SYNPOQ8N3V7 929 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 THAP3Q8WTV1 239 aaPredicted RBP15.36■□□□□ 0.05
SCAF1-201ENST00000360565 FCAMRQ8WWV6 532 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 CA5BQ9Y2D0 317 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 NINQ8N4C6 2090 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 ASPDHA6ND91 283 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 ANXA3P12429 323 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 VAMP1P23763 118 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 ILKQ13418 452 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 LHX8Q68G74 356 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 PRRG4Q9BZD6 226 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 GLIPR2Q9H4G4 154 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 RNF121Q9H920 327 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 KCMF1Q9P0J7 381 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 KLK4Q9Y5K2 254 aa15.36■□□□□ 0.05
SCAF1-201ENST00000360565 METTL21EPA6NDL7 271 aa15.35■□□□□ 0.05
SCAF1-201ENST00000360565 NDUFB2O95178 105 aa15.35■□□□□ 0.05
SCAF1-201ENST00000360565 CAV3P56539 151 aa15.35■□□□□ 0.05
SCAF1-201ENST00000360565 PUS10Q3MIT2 529 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms