RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 DPCDQ9BVM2 203 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 CCDC106Q9BWC9 280 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 C8orf33Q9H7E9 229 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 PLEKHJ1Q9NW61 149 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SAGE2PA6NJ88 616 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 MAOAP21397 527 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 CD68P34810 354 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SOX18P35713 384 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 STC1P52823 247 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 LEXMQ3ZCV2 418 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SLC36A3Q495N2 470 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 CDONQ4KMG0 1287 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SLC16A9Q7RTY1 509 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 PDZD9Q8IXQ8 264 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 ZC3H3Q8IXZ2 948 aaKnown RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 LRRC57Q8N9N7 239 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 HES7Q9BYE0 225 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 MUTYHQ9UIF7 546 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 BAIAP2Q9UQB8 552 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 I3L521 148 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 HSD17B6O14756 317 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 EMC8O43402 210 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 PIAS2O75928 621 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SCAF4O95104 1147 aaKnown RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 DRD1P21728 446 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SDHBP21912 280 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 CNR2P34972 360 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 KCNC3Q14003 757 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 EFR3AQ14156 821 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 VASNQ6EMK4 673 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF550Q7Z398 422 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 VWA5B2Q8N398 1253 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SGTBQ96EQ0 304 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 INSM2Q96T92 566 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 CLEC5AQ9NY25 188 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 H7C1Q1 480 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 K7ESM1 405 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 ABCB7O75027 752 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 GPIP06744 558 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 NTRK2Q16620 822 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 DCAF12Q5T6F0 453 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 ANKK1Q8NFD2 765 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 XYLT2Q9H1B5 865 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 A0A0G2JPF8 293 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 HNRNPCL3B7ZW38 293 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 LRRN3E7EW58 273 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF780AO75290 641 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 TNFSF15O95150 251 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 HNRNPCL4P0DMR1 293 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 ANXA8P13928 327 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 RAC2P15153 192 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 CSNK2A1P68400 391 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 KLHDC9Q8NEP7 349 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 CSNK2A3Q8NEV1 391 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SMAP2Q8WU79 429 aaPredicted RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 PTERQ96BW5 349 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 TSPAN18Q96SJ8 248 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 SLC30A3Q99726 388 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 RPP25Q9BUL9 199 aaKnown RBP6.94□□□□□ -1.3
VPS13A-202ENST00000357409 INIPQ9NRY2 104 aa6.94□□□□□ -1.3
VPS13A-202ENST00000357409 C4orf47A7E2U8 309 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 FLRT2O43155 660 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 PAX3P23760 479 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 GPR19Q15760 415 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 NPY5RQ15761 445 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 PAN3Q58A45 887 aaKnown RBP6.93□□□□□ -1.3
VPS13A-202ENST00000357409 PIANPQ8IYJ0 282 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 RLIMQ9NVW2 624 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 UNC13AQ9UPW8 1703 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 HNF1AP20823 631 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 UQCRC2P22695 453 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 CCR7P32248 378 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 KDELR2P33947 212 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 THBS2P35442 1172 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 VMACQ2NL98 169 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 DPAGT1Q9H3H5 408 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 STUB1Q9UNE7 303 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 PREX2Q70Z35 1606 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 SHISA8B8ZZ34 492 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 ATF6P18850 670 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 OR8B8Q15620 311 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 ZNF610Q8N9Z0 462 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 ADAMTS18Q8TE60 1221 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 DDX1Q92499 740 aaKnown RBP6.93□□□□□ -1.3
VPS13A-202ENST00000357409 SIGLEC10Q96LC7 697 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 NECAB3Q96P71 396 aaPredicted RBP6.93□□□□□ -1.3
VPS13A-202ENST00000357409 RBM14Q96PK6 669 aaKnown RBP6.93□□□□□ -1.3
VPS13A-202ENST00000357409 LPAR2Q9HBW0 351 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 ATP23Q9Y6H3 246 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 C1orf226A1L170 272 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 AQP9O43315 295 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 ENTPD6O75354 484 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 SLC15A1P46059 708 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 COL28A1Q2UY09 1125 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 LRRN1Q6UXK5 716 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 FAM57BQ71RH2 274 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 GLCCI1Q86VQ1 547 aa6.93□□□□□ -1.3
VPS13A-202ENST00000357409 UEVLDQ8IX04 471 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms