RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TSPAN10Q9H1Z9 355 aaPredicted RBP9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 TPT1P8Q9HAU6 139 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 TREX1Q9NSU2 369 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 FAM86C1Q9NVL1 165 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 SPG21Q9NZD8 308 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 MYO10Q9HD67 2058 aa9.08□□□□□ -0.96
PTCHD4-201ENST00000339488 TRBV5-3A0A0A0MS03 114 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 A6NNC1 897 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 IFRD1O00458 451 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 STK25O00506 426 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 TIMP2P16035 220 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 CCND3P30281 292 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 S100A7P31151 101 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PITPNBP48739 271 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 TNFRSF9Q07011 255 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 ZRANB3Q5FWF4 1079 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 ATG9BQ674R7 924 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 CXorf57Q6NSI4 855 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 ADAM5Q6NVV9 412 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PAPD4Q6PIY7 484 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PAQR3Q6TCH7 311 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 METAP1DQ6UB28 335 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PPP1R3BQ86XI6 285 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 NAXDQ8IW45 347 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 DEFB106AQ8N104 65 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 C1orf127Q8N9H9 656 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 GNPDA2Q8TDQ7 276 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 DUSP16Q9BY84 665 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PARD6GQ9BYG4 376 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 MFFQ9GZY8 342 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC25A32Q9H2D1 315 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 RASL12Q9NYN1 266 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 ST3GAL5Q9UNP4 418 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PCDHB9Q9Y5E1 797 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 A0A1W2PPH5 198 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 H7C1Q1 480 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 SULT2B1O00204 365 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 TLR4O00206 839 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 MBTPS2O43462 519 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 IGHV2-5P01817 119 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 HIST1H2ABP04908 130 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 CPEP16870 476 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 RAC1P63000 192 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 DHODHQ02127 395 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 RSU1Q15404 277 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PLK5Q496M5 336 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 PSRC1Q6PGN9 363 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 HIST3H2AQ7L7L0 130 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 LHFPL3Q86UP9 236 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 CILP2Q8IUL8 1156 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 ARMC10Q8N2F6 343 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 OR10D4PQ8NGN7 298 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 HIST1H2ACQ93077 130 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 EPYCQ99645 322 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 DUSP15Q9H1R2 295 aaPredicted RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 TMEM185BQ9H7F4 350 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 FNDC3AQ9Y2H6 1198 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 GSTK1Q9Y2Q3 226 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 AAR2Q9Y312 384 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 SF3B6Q9Y3B4 125 aaKnown RBP9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 SLX4Q8IY92 1834 aa9.07□□□□□ -0.96
PTCHD4-201ENST00000339488 TMEM72A0PK05 275 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SOWAHBA6NEL2 793 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RFPL4AA6NLU0 287 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 C5orf58C9J3I9 102 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RFPL4AL1F8VTS6 287 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 H3BN98 237 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 KCNAB3O43448 404 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PRICKLE3O43900 615 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 KRT33AO76009 404 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SOX30O94993 753 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RAB3DO95716 219 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 GASTP01350 101 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 THP07101 528 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PIRTP0C851 137 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 CELP19835 753 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 STARD6P59095 220 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 BEX3Q00994 111 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SNTB2Q13425 540 aaKnown RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 VMACQ2NL98 169 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 THEM4Q5T1C6 240 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 DCAF15Q66K64 600 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RPL13AP3Q6NVV1 102 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 UBAC2Q8NBM4 344 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 NLGN2Q8NFZ4 835 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 OR52E4Q8NGH9 312 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 OR52I1Q8NGK6 324 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 OR56B4Q8NH76 319 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 GRAPLQ8TC17 118 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PAQR8Q8TEZ7 354 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 FCRL5Q96RD9 977 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 ZNF559Q9BR84 538 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 SLC38A1Q9H2H9 487 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 CD84Q9UIB8 345 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RCE1Q9Y256 329 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 RASD1Q9Y272 281 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 OR2M5A3KFT3 312 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 DDTLA6NHG4 134 aaPredicted RBP9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 MOXD2PA6NHM9 499 aa9.06□□□□□ -0.96
PTCHD4-201ENST00000339488 PSMD3O43242 534 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms