RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 TBC1D3KA0A087X1G2 549 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 TBC1D3FA6NER0 549 aaPredicted RBP21.84■■□□□ 1.09
NDEL1-201ENST00000334527 TBC1D3LB9A6J9 549 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 RFXAPO00287 272 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 LALBAP00709 142 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 TBC1D3HP0C7X1 549 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 CAV3P56539 151 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 RPS15AP62244 130 aaKnown RBP21.84■■□□□ 1.09
NDEL1-201ENST00000334527 SF3B4Q15427 424 aaKnown RBP eCLIP21.84■■□□□ 1.093e-11■■■■□ 20.8
NDEL1-201ENST00000334527 PGGHGQ32M88 737 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 TBC1D3GQ6DHY5 549 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 TBC1D3CQ6IPX1 549 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 MBOAT2Q6ZWT7 520 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 ASPGQ86U10 573 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 TBC1D3Q8IZP1 549 aaPredicted RBP21.84■■□□□ 1.09
NDEL1-201ENST00000334527 SIMC1Q8NDZ2 872 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 OR2M4Q96R27 311 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 PRSS38A1L453 326 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 CSF3P09919 207 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 CPN2P22792 545 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 GDI1P31150 447 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 FGF9P31371 208 aaPredicted RBP21.84■■□□□ 1.09
NDEL1-201ENST00000334527 CDC73Q6P1J9 531 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 FBXO46Q6PJ61 603 aaPredicted RBP21.84■■□□□ 1.09
NDEL1-201ENST00000334527 CD200R1LQ6Q8B3 271 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 ZNF620Q6ZNG0 422 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 BBS1Q8NFJ9 593 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 SLC7A7Q9UM01 511 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 WDR45Q9Y484 360 aa21.84■■□□□ 1.09
NDEL1-201ENST00000334527 KLF4O43474 513 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 OR5F1O95221 314 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 ADPRHP54922 357 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 TNFRSF17Q02223 184 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 MADCAM1Q13477 382 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 ASAH1Q13510 395 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 DSG2Q14126 1118 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 PYDC2Q56P42 97 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 ATAD3CQ5T2N8 411 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 GDPD1Q8N9F7 314 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 SLC22A4Q9H015 551 aa21.83■■□□□ 1.09
NDEL1-201ENST00000334527 MTHFD2LQ9H903 347 aaPredicted RBP21.83■■□□□ 1.09
NDEL1-201ENST00000334527 CACYBPQ9HB71 228 aaKnown RBP21.83■■□□□ 1.09
NDEL1-201ENST00000334527 CASKO14936 926 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 TFECO14948 347 aaPredicted RBP21.83■■□□□ 1.08
NDEL1-201ENST00000334527 SLC2A10O95528 541 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 RCVRNP35243 200 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 CLDN2P57739 230 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 TMEM44Q2T9K0 475 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 FAM109BQ6ICB4 259 aaPredicted RBP21.83■■□□□ 1.08
NDEL1-201ENST00000334527 UTS2BQ765I0 119 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 LSRQ86X29 649 aaPredicted RBP21.83■■□□□ 1.08
NDEL1-201ENST00000334527 OR4N5Q8IXE1 308 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 PEX5LQ8IYB4 626 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 ZCCHC10Q8TBK6 192 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 SCARF2Q96GP6 870 aaPredicted RBP21.83■■□□□ 1.08
NDEL1-201ENST00000334527 TMED9Q9BVK6 235 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 ZNF232Q9UNY5 417 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 CSNK1G3Q9Y6M4 447 aa21.83■■□□□ 1.08
NDEL1-201ENST00000334527 AK4P27144 223 aaPredicted RBP21.82■■□□□ 1.08
NDEL1-201ENST00000334527 ZNF836Q6ZNA1 936 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 GALNT12Q8IXK2 581 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 DCLRE1CQ96SD1 692 aaKnown RBP21.82■■□□□ 1.08
NDEL1-201ENST00000334527 MMP28Q9H239 520 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 TBC1D17Q9HA65 648 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 MED17Q9NVC6 651 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 NLGN3Q9NZ94 848 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 KLF15Q9UIH9 416 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 REV3LO60673 3130 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 ATG2AQ2TAZ0 1938 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 TRDV1A0A1B0GX56 115 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 POLR1CO15160 346 aaPredicted RBP21.82■■□□□ 1.08
NDEL1-201ENST00000334527 AGR2O95994 175 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 SLC35G6P0C7Q6 338 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 SSTR4P31391 388 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 KIR2DL1P43626 348 aaPredicted RBP21.82■■□□□ 1.08
NDEL1-201ENST00000334527 SIM1P81133 766 aaPredicted RBP21.82■■□□□ 1.08
NDEL1-201ENST00000334527 IFITM2Q01629 132 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 ZNF791Q3KP31 576 aaPredicted RBP21.82■■□□□ 1.08
NDEL1-201ENST00000334527 ITPRIPL2Q3MIP1 535 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 ZNF628Q5EBL2 1059 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 KLHL36Q8N4N3 616 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 OR2T33Q8NG76 320 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 OR4K14Q8NGD5 310 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 NT5CQ8TCD5 201 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 SRMSQ9H3Y6 488 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 NTMQ9P121 344 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 COMMD3Q9UBI1 195 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 CDH10Q9Y6N8 788 aa21.82■■□□□ 1.08
NDEL1-201ENST00000334527 TRBV23OR9-2A0A075B6M9 112 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 POM121BA6NF01 834 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 K7EQS6 105 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 CDC42EP2O14613 210 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 HTR1FP30939 366 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 ATP6V1E1P36543 226 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 ZNF155Q12901 538 aaPredicted RBP21.81■■□□□ 1.08
NDEL1-201ENST00000334527 DUSP5Q16690 384 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 RD3Q7Z3Z2 195 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 OTULINQ96BN8 352 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 SAMD8Q96LT4 415 aa21.81■■□□□ 1.08
NDEL1-201ENST00000334527 HDHD5Q9BXW7 423 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms