RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ALOX5P09917 674 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 RIPPLY2Q5TAB7 128 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 CAMKMTQ7Z624 323 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 IFNEQ86WN2 208 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 TRIM42Q8IWZ5 723 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 SLC16A11Q8NCK7 471 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 PSMA8Q8TAA3 256 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 DUSP26Q9BV47 211 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 NEUROD4Q9HD90 331 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 KCNJ16Q9NPI9 418 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 PNPOQ9NVS9 261 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 THAP1Q9NVV9 213 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 FLRT3Q9NZU0 649 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 CACNA1CQ13936 2221 aa25.12■■□□□ 1.61
ATPAF1-201ENST00000329231 A0A0G2JNJ9 132 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 FAM90A27PA6NNH2 459 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 UTS2O95399 124 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 EPPINO95925 133 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 ACP2P11117 423 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 DIO3P55073 304 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 ACSF3Q4G176 576 aaPredicted RBP25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 ATG16L1Q676U5 607 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 ENPP6Q6UWR7 440 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 OR56A1Q8NGH5 318 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 FBXO30Q8TB52 745 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 NUDT8Q8WV74 236 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 C16orf58Q96GQ5 468 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 WDYHV1Q96HA8 205 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 TBL1XR1Q9BZK7 514 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 MEAF6Q9HAF1 191 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 Q9UFV3 132 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 CACNA1DQ01668 2161 aa25.11■■□□□ 1.61
ATPAF1-201ENST00000329231 NOTCH2Q04721 2471 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 HMGB1P1B2RPK0 211 aaPredicted RBP25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 C6orf47O95873 294 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 IGKV1D-16P01601 117 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 HMGN2P05204 90 aaKnown RBP25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 SNRPB2P08579 225 aaKnown RBP25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 LBPP18428 481 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 DPP4P27487 766 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 ADH7P40394 386 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 KIR3DL1P43629 444 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 CCT3P49368 545 aaKnown RBP25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 DUSP5Q16690 384 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 PGS1Q32NB8 556 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 SPDYE7PQ495Y7 208 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 DCST1Q5T197 706 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 AAGABQ6PD74 315 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 LACC1Q8IV20 430 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 JADE3Q92613 823 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 UCK2Q9BZX2 261 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 DSN1Q9H410 356 aa25.1■■□□□ 1.61
ATPAF1-201ENST00000329231 CFLARO15519 480 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 SASH3O75995 380 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 DSCR4P56555 118 aaPredicted RBP25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 STX5Q13190 355 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 LASP1Q14847 261 aaKnown RBP25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 EXOSC6Q5RKV6 272 aaKnown RBP25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 MARCH3Q86UD3 253 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 MCEMP1Q8IX19 187 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 COX18Q8N8Q8 333 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 FADS6Q8N9I5 356 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 SFXN5Q8TD22 340 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 MOAP1Q96BY2 351 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 CHMP6Q96FZ7 201 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 STACQ99469 402 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 SPOCK3Q9BQ16 436 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 YIPF4Q9BSR8 244 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 DPY30Q9C005 99 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 CXorf36Q9H7Y0 433 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 HHATLQ9HCP6 504 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 DUSP22Q9NRW4 184 aa25.09■■□□□ 1.61
ATPAF1-201ENST00000329231 NKX2-6A6NCS4 301 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 HSPB2A8KAH6 182 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 SNNO75324 88 aaPredicted RBP25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 TOXO94900 526 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 SOX30O94993 753 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 KCNK2O95069 426 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 KRT16P08779 473 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 CPN1P15169 458 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 LCN1P31025 176 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 GFRA1P56159 465 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 TP53BP2Q13625 1128 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 HSPB2Q16082 182 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 CPEB4Q17RY0 729 aaKnown RBP eCLIP25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 GRAMD1BQ3KR37 738 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 NSUN5P2Q63ZY6 315 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 CRYBG3Q68DQ2 2970 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 OR2M3Q8NG83 312 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 FAM110BQ8TC76 370 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 DUSP19Q8WTR2 217 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 SFXN2Q96NB2 322 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 PTGES2Q9H7Z7 377 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 MANSC1Q9H8J5 431 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 GIN1Q9NXP7 522 aa25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 FAF1Q9UNN5 650 aaPredicted RBP25.08■■□□□ 1.61
ATPAF1-201ENST00000329231 CENPEQ02224 2701 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 C17orf51A8MQB3 221 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 ZIC3O60481 467 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 NGFRP08138 427 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms