RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ZFP28Q8NHY6 868 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 MBD3L2Q8NHZ7 208 aaPredicted RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 FBXO30Q8TB52 745 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 TUBGCP3Q96CW5 907 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 OTUB1Q96FW1 271 aaPredicted RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 GPATCH2Q9NW75 528 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 ALKBH4Q9NXW9 302 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 PHF3Q92576 2039 aaKnown RBP13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 KIAA1549Q9HCM3 1950 aa13.24□□□□□ -0.29
PPP1CA-201ENST00000312989 TMEM120BA0PK00 339 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 CD8B2A6NJW9 211 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 EMC8O43402 210 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 SCO2O43819 266 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 KCNK2O95069 426 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 UTS2O95399 124 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 ACTL6AO96019 429 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 ZNF708P17019 499 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 GPC1P35052 558 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 TIMP3P35625 211 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 KRT20P35900 424 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 HPCAL1P37235 193 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 ZFP36L2P47974 494 aaKnown RBP13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 STARP49675 285 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 SLC18A1P54219 525 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 CLDN8P56748 225 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 PHC1P78364 1004 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 TMEM44Q2T9K0 475 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 GRAMD1BQ3KR37 738 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 PLXDC2Q6UX71 529 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 GALNT10Q86SR1 603 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 TRIM42Q8IWZ5 723 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 OR4C3Q8NH37 302 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 RMND5BQ96G75 393 aaPredicted RBP13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 PPP1R36Q96LQ0 422 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 UCN2Q96RP3 112 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 TUBA1CQ9BQE3 449 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 CENPHQ9H3R5 247 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 SERHL2Q9H4I8 314 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 PNPOQ9NVS9 261 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 TAS2R10Q9NYW0 307 aa13.23□□□□□ -0.29
PPP1CA-201ENST00000312989 A0A1W2PRB8 838 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 C6orf47O95873 294 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 HMGN2P05204 90 aaKnown RBP13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 NGFRP08138 427 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 PRPS1L1P21108 318 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 RPL14P50914 215 aaKnown RBP13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 PRKAG1P54619 331 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 PRR5P85299 388 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 TOMM20Q15388 145 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 ZCCHC12Q6PEW1 402 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 CROCCP2Q86T23 111 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 LACC1Q8IV20 430 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 DMRTC2Q8IXT2 367 aaPredicted RBP13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 PM20D2Q8IYS1 436 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 C9orf106Q8NAJ2 232 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 CEP70Q8NHQ1 597 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 ZPLD1Q8TCW7 415 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 GPR151Q8TDV0 419 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 OR5P2Q8WZ92 322 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 C14orf79Q96F83 325 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 NPAS1Q99742 590 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 SH3GL2Q99962 352 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 BHLHE41Q9C0J9 482 aaPredicted RBP13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 DSN1Q9H410 356 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 MEAF6Q9HAF1 191 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 TMBIM4Q9HC24 238 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 ZCCHC3Q9NUD5 404 aaKnown RBP13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 MED11Q9P086 117 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 CLCF1Q9UBD9 225 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 KCNE3Q9Y6H6 103 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 MED12Q93074 2177 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 MYO9AB2RTY4 2548 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 PKDREJQ9NTG1 2253 aa13.22□□□□□ -0.29
PPP1CA-201ENST00000312989 ALG1L2C9J202 215 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 HCRTR2O43614 444 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 SNUPNO95149 360 aaKnown RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 OXSR1O95747 527 aaPredicted RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 ALDOCP09972 364 aaKnown RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 MYZAPP0CAP1 466 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 CHMP24386 653 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 DPP4P27487 766 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 RPL3P39023 403 aaKnown RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 DSCR4P56555 118 aaPredicted RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 HBA1P69905 142 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 STX3Q13277 289 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 LASP1Q14847 261 aaKnown RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 ZNHIT3Q15649 155 aaPredicted RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 CCNJQ5T5M9 372 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 CPTPQ5TA50 214 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 MEX3BQ6ZN04 569 aaKnown RBP13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 GDF7Q7Z4P5 450 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 IFNEQ86WN2 208 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 LRRC34Q8IZ02 419 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 CLECL1Q8IZS7 167 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 ANKRD42Q8N9B4 389 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 OR10Q1Q8NGQ4 319 aa13.21□□□□□ -0.29
PPP1CA-201ENST00000312989 OR14L1PQ8NHC6 308 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms