RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 NANSQ9NR45 359 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 GPATCH2Q9NW75 528 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 MCUBQ9NWR8 336 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 SPHK1Q9NYA1 384 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 SPIN1Q9Y657 262 aaPredicted RBP15.3■□□□□ 0.04
CTCF-201ENST00000264010 GBF1Q92538 1859 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 ARRDC5A6NEK1 342 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 RAB36O95755 333 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 ADORA3P0DMS8 318 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 FNTBP49356 437 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 RGS6P49758 472 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 BLKP51451 505 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 STX4Q12846 297 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 SLC48A1Q6P1K1 146 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 LINC00299Q6ZSB3 139 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.3■□□□□ 0.04
CTCF-201ENST00000264010 OR4N5Q8IXE1 308 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 OSTF1Q92882 214 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 LRR1Q96L50 414 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 C8orf33Q9H7E9 229 aaPredicted RBP15.3■□□□□ 0.04
CTCF-201ENST00000264010 REV1Q9UBZ9 1251 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 CA5BQ9Y2D0 317 aa15.3■□□□□ 0.04
CTCF-201ENST00000264010 A0A1W2PR48 441 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 MAN2B1O00754 1011 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 CASKO14936 926 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 MVDP53602 400 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 CTF1Q16619 201 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 OR4C15Q8NGM1 316 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 SLC22A8Q8TCC7 542 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 OR1E3Q8WZA6 343 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 C16orf58Q96GQ5 468 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 MS4A4EQ96PG1 132 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 BTBD2Q9BX70 525 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 TMEM138Q9NPI0 162 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 CDV3Q9UKY7 258 aaKnown RBP15.29■□□□□ 0.04
CTCF-201ENST00000264010 A0A0A6YYD5 115 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 FAM86C2PA6NEL3 165 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 PPM1DO15297 605 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 IGFBP4P22692 258 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 CD40LGP29965 261 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 SELENBP1Q13228 472 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 CLVS2Q5SYC1 327 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 TCTN3Q6NUS6 607 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 KIAA1211LQ6NV74 962 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 SLC22A4Q9H015 551 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 OR51E2Q9H255 320 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 MTHFD2LQ9H903 347 aaPredicted RBP15.29■□□□□ 0.04
CTCF-201ENST00000264010 ZBTB20Q9HC78 741 aaPredicted RBP15.29■□□□□ 0.04
CTCF-201ENST00000264010 MKLN1Q9UL63 735 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 NAALAD2Q9Y3Q0 740 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 TRAV6A0A075B6T7 132 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 LIPAP38571 399 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 CASP3P42574 277 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 KIAA1024LP59773 190 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 MLLT1Q03111 559 aaPredicted RBP15.29■□□□□ 0.04
CTCF-201ENST00000264010 MLIPQ5VWP3 458 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 FAM122CQ6P4D5 195 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 SLC46A3Q7Z3Q1 461 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 RBM45Q8IUH3 476 aaKnown RBP15.29■□□□□ 0.04
CTCF-201ENST00000264010 ZNF226Q9NYT6 803 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 ACTR10Q9NZ32 417 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 NLGN3Q9NZ94 848 aa15.29■□□□□ 0.04
CTCF-201ENST00000264010 OR5K4A6NMS3 321 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 B8ZZF3 427 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 STK25O00506 426 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 KIAA0513O60268 411 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 PTHP01270 115 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 F3P13726 295 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 HPGDP15428 266 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 CTHP32929 405 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 RORCP51449 518 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 HMGA2P52926 109 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 PCBP4P57723 403 aaKnown RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 TMEM196Q5HYL7 178 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 COQ8AQ8NI60 647 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 UFD1Q92890 307 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 CSF3RQ99062 836 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 TBC1D29Q9UFV1 150 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 YBX2Q9Y2T7 364 aaKnown RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 PCYT1BQ9Y5K3 369 aaPredicted RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 VCANP13611 3396 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 ZAR1LA6NP61 321 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 CHST10O43529 356 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 SAGP10523 405 aaPredicted RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 CD72P21854 359 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 MAB21L1Q13394 359 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 MLC1Q15049 377 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 MLF2Q15773 248 aaPredicted RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 ZNF750Q32MQ0 723 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 PUS10Q3MIT2 529 aaKnown RBP15.28■□□□□ 0.04
CTCF-201ENST00000264010 ATAD3CQ5T2N8 411 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 KCT2Q8NC54 265 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 AP3S1Q92572 193 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 ZFYVE21Q9BQ24 234 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 AIFM2Q9BRQ8 373 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 WACQ9BTA9 647 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 ASPNQ9BXN1 380 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 OR10H1Q9Y4A9 318 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 POM121BA6NF01 834 aa15.28■□□□□ 0.04
CTCF-201ENST00000264010 MRPS21P82921 87 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms