RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 DOK1Q99704 481 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 OCEL1Q9H607 264 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 NMNAT1Q9HAN9 279 aaPredicted RBP18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 KIF17Q9P2E2 1029 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 ORC6Q9Y5N6 252 aa18.27■□□□□ 0.52
TNFRSF1A-201ENST00000162749 TCRBV16S1A1N1A0A5B0 115 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CLPSP04118 112 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CDK4P11802 303 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TNNI3P19429 210 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TTKP33981 857 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZFP36L1Q07352 338 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNHIT3Q15649 155 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 MICAQ29983 383 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF691Q5VV52 312 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PEX5LQ8IYB4 626 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF619Q8N2I2 560 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PIK3C3Q8NEB9 887 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 GIPC3Q8TF64 312 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NAA50Q9GZZ1 169 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PNO1Q9NRX1 252 aaKnown RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RLIMQ9NVW2 624 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 A4GNTQ9UNA3 340 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PCNX2A6NKB5 2137 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 AGAP5A6NIR3 686 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PCDH17O14917 1159 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 KIAA0513O60268 411 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 GDF9O60383 454 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 BRINP1O60477 761 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SOX30O94993 753 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 KCNK2O95069 426 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ATE1O95260 518 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 HTR1AP08908 422 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 JUNBP17275 347 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CSTF2P33240 577 aaKnown RBP eCLIP18.26■□□□□ 0.517e-7■□□□□ 8.4
TNFRSF1A-201ENST00000162749 COLEC12Q5KU26 742 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DHRS4L2Q6PKH6 230 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TSPYL5Q86VY4 417 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 OR4N2Q8NGD1 307 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CLIP3Q96DZ5 547 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SENP5Q96HI0 755 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FEVQ99581 238 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 VN1R1Q9GZP7 353 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 KCNE5Q9UJ90 142 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 MKL2Q9ULH7 1088 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF443Q9Y2A4 671 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 GPR55Q9Y2T6 319 aaPredicted RBP18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 IFT52Q9Y366 437 aa18.26■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CLDN24A6NM45 220 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TMX2-CTNND1H3BSU7 103 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CDX4O14627 284 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RPS4Y1P22090 263 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RORAP35398 523 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TPD52P55327 224 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PIN1Q13526 163 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TRA2AQ13595 282 aaKnown RBP eCLIP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NSDHLQ15738 373 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NPTX1Q15818 432 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 BROXQ5VW32 411 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 LAIR1Q6GTX8 287 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NPSR1Q6W5P4 371 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CLIP4Q8N3C7 705 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 OR10G2Q8NGC3 310 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 OR13F1Q8NGS4 319 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 DHRS1Q96LJ7 313 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TUBA1CQ9BQE3 449 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TGIF2Q9GZN2 237 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TIMMDC1Q9NPL8 285 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 KRT84Q9NSB2 600 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 IGLV3-12A0A075B6K2 115 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 H3BMQ9 156 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FRS3O43559 492 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ABCB7O75027 752 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CT45A8P0DMV1 189 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CT45A9P0DMV2 189 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ITGAMP11215 1152 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FOXD4Q12950 439 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SF3A2Q15428 464 aaKnown RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 MAPK14Q16539 360 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 NKAIN1Q4KMZ8 207 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 CT45A2Q5DJT8 189 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 SLC5A8Q8N695 610 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF420Q8TAQ5 688 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 STT3BQ8TCJ2 826 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FBLIM1Q8WUP2 373 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 COG8Q96MW5 612 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ALPK1Q96QP1 1244 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ARHGDIGQ99819 225 aa18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TRIM45Q9H8W5 580 aaPredicted RBP18.25■□□□□ 0.51
TNFRSF1A-201ENST00000162749 HEATR5AQ86XA9 2040 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 TRBV4-1A0A0J9YWV2 114 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 A8MUA0 341 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PEX12O00623 359 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 THBS1P07996 1170 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RYKP34925 604 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 FOXL2P58012 376 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 IL1RL1Q01638 556 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 PIGFQ07326 219 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 RAPSNQ13702 412 aa18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ELAVL1Q15717 326 aaKnown RBP18.24■□□□□ 0.51
TNFRSF1A-201ENST00000162749 ZNF385CQ66K41 422 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms