RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 NPRL3Q12980 569 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 TUBA3CQ13748 450 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 ULK3Q6PHR2 472 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SHFQ7M4L6 423 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 L3MBTL4Q8NA19 623 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 PROKR1Q8TCW9 393 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 HDAC2Q92769 488 aaKnown RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 BORCS8Q96FH0 119 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 OR7D2Q96RA2 312 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SORT1Q99523 831 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 CTRCQ99895 268 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 EMCNQ9ULC0 261 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 PLEKHM1Q9Y4G2 1056 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 SDK1Q7Z5N4 2213 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 A0A0X1KG70 313 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 POM121BA6NF01 834 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 GGT3PA6NGU5 568 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 IDUAP35475 653 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 PAGE3Q5JUK9 113 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF565Q8N9K5 539 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 OR4K13Q8NH42 304 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 NETO1Q8TDF5 533 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 EDEM2Q9BV94 578 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 MS4A8Q9BY19 250 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 CLMPQ9H6B4 373 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 MALT1Q9UDY8 824 aa9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 PRRC2BQ5JSZ5 2229 aaKnown RBP9.74□□□□□ -0.85
NIPAL3-201ENST00000003912 GPX3P22352 226 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 DCKP27707 260 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ACVR1BP36896 505 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 DCTP40126 519 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 OPRD1P41143 372 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ST3GAL4Q11206 333 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ECH1Q13011 328 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 THOC7Q6I9Y2 204 aaKnown RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 C6orf15Q6UXA7 325 aaPredicted RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 VRK3Q8IV63 474 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM178AQ8NBL3 297 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ARL5BQ96KC2 179 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 MKRN2Q9H000 416 aaKnown RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF639Q9UID6 485 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TARM1B6A8C7 271 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 K7ESM1 405 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 M0R3H8 397 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 LSM1O15116 133 aaKnown RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 NOS1APO75052 506 aaPredicted RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 CR2P20023 1033 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 FUT4P22083 530 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 GABRB3P28472 473 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 GNG2P59768 71 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ZBED5Q49AG3 693 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 OTUD1Q5VV17 481 aaPredicted RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 WBP2NLQ6ICG8 309 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 PAPD4Q6PIY7 484 aaKnown RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF367Q7RTV3 350 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 MISPQ8IVT2 679 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 CCDC107Q8WV48 283 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 BIRC8Q96P09 236 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 DCSTAMPQ9H295 470 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 PRDM9Q9NQV7 894 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 PLEKHA6Q9Y2H5 1048 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 GPR45Q9Y5Y3 372 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 NME4O00746 187 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF749O43361 778 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 SOX2P48431 317 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TUBA1BP68363 451 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TUBA4AP68366 448 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 NKX3-2P78367 333 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TUBA1AQ71U36 451 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 PDSS2Q86YH6 399 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TIGD4Q8IY51 512 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 HS3ST5Q8IZT8 346 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ELP5Q8TE02 316 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM239Q8WW34 195 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 HOXB13Q92826 284 aaPredicted RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 S100A16Q96FQ6 103 aaKnown RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 COQ10AQ96MF6 247 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 CDX2Q99626 313 aaPredicted RBP9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TBC1D29Q9UFV1 150 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 CAMK2AQ9UQM7 478 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 NME7Q9Y5B8 376 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 METTL12A8MUP2 240 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 PPP6CO00743 305 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 AHCYL1O43865 530 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 FUT1P19526 365 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 OR7A5Q15622 319 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 EXT1Q16394 746 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 RUNDC3AQ59EK9 446 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 TMEM53Q6P2H8 277 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF773Q6PK81 442 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 C6orf89Q6UWU4 347 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 LMNTD1Q8N9Z9 388 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 SPTSSAQ969W0 71 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 LRR1Q96L50 414 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 FAM210AQ96ND0 272 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 FEVQ99581 238 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 MYH15Q9Y2K3 1946 aa9.73□□□□□ -0.85
NIPAL3-201ENST00000003912 NPIPA5A0A0B4J1W7 369 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 FAM172BPA6NC97 362 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms