RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Zfp952B0V2W4 504 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gsg1lD3Z7H4 322 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn2r59E9PUT5 865 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 H2-M1F7CXU4 344 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 CapgP24452 352 aaKnown RBP8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Snai2P97469 269 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tanc1Q0VGY8 1856 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tfcp2l1Q3UNW5 479 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Nr2c1Q505F1 590 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cdh12Q5RJH3 794 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ugt1a9Q62452 528 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Egfl8Q6GUQ1 293 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Bfsp2Q6NVD9 416 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Thap4Q6P3Z3 569 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Inca1Q6PKN7 231 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 MroQ7TNB4 248 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1371Q7TQT7 311 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr670Q7TRP3 312 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ttll4Q80UG8 1193 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Q8BH50 245 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Znf2Q8BIQ3 427 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Itih5Q8BJD1 952 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Shc2Q8BMC3 573 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tmem209Q8BRG8 561 aaKnown RBP8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 GanQ8CA72 597 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Stau2Q8CJ67 570 aaKnown RBP8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1461Q8VEV7 312 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1325Q8VF43 315 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr523Q8VFE7 317 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr665Q8VG79 316 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 MtapQ9CQ65 283 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cldnd1Q9CQX5 253 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Arv1Q9D0U9 266 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gabra4Q9D6F4 552 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fam3aQ9D8T0 230 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr945Q9EQB5 319 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Dusp10Q9ESS0 483 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cdc20Q9JJ66 499 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Abhd1Q9QZC8 412 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fbxo8Q9QZN3 319 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Orc5Q9WUV0 435 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Entpd5Q9WUZ9 427 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 XdhQ00519 1335 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Fbxo47A2A6H3 451 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Slc43a3A2AVZ9 502 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tmigd3G3X8R9 209 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gcm2O09102 504 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mllt10O54826 1068 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Amy1P00687 511 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cbx2P30658 519 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 TankP70347 448 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Lingo4Q149C3 593 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Spryd7Q3TFQ1 196 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Pid1Q3UBG2 217 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Ugt3a1Q3UP75 523 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Elf3Q3UPW2 391 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mansc4Q3UU94 337 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Sox16Q62247 57 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tas2r106Q7M724 308 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Il17fQ7TNI7 161 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr1474Q7TQQ8 314 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Megf11Q80T91 1091 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Nanos1Q80WY3 267 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Slc38a9Q8BGD6 560 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 GldnQ8BMF8 549 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gen1Q8BMI4 908 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Exosc6Q8BTW3 273 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Slco2b1Q8BXB6 683 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Epc1Q8C9X6 813 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Phtf2Q8CB19 747 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Trim61Q8JZK6 461 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 PvrQ8K094 408 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 B3gnt7Q8K0J2 397 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Vmn1r210Q8R274 306 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cadm1Q8R5M8 456 aaKnown RBP8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr354Q8VGJ8 317 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Plrg1Q922V4 513 aaKnown RBP8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Stoml2Q99JB2 353 aaKnown RBP8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tmem50aQ9CXL1 157 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Slc52a3Q9D6X5 460 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Mfsd1Q9DC37 464 aa8.48□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Aox4Q3TYQ9 1336 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Adgra3Q7TT36 1310 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Col20a1Q923P0 1320 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Col11a1Q61245 1804 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Trbv23A0A0A6YWQ1 115 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Zfp980A2A9J5 645 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm13547A2ARC0 163 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Olfr600E9PUN7 314 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tstd1E9PY03 133 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Psg20E9Q9B4 475 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gm20671F6TVX7 576 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Scgb2b19J3QM75 112 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Lin7cO88952 197 aaKnown RBP8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Cdh1P09803 884 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Khdc1bP0C7A0 126 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Itgb7P26011 806 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 RetP35546 1115 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 P2ry1P49650 373 aa8.47□□□□□ -1.05
Upf3b-201ENSMUST00000076265 PitpnaP53810 271 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 62.7 ms