RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 CpoxP36552 443 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cnr2P47936 347 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 GlaP51569 419 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Lmf1Q3U3R4 574 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Lyrm4Q8K215 91 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dlgap5Q8K4R9 808 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr351Q8VGK1 310 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mrpl37Q921S7 423 aaKnown RBP11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MINDY3Q9CV28 444 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 RgccQ9DBX1 137 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Socs6Q9JLY0 533 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dnajb1Q9QYJ3 340 aaKnown RBP11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Nr4a3Q9QZB6 627 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Znf106O88466 1888 aa11.21□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn1r77E9PY60 306 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm8906L7N2A2 181 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ap1g1P22892 822 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 AcadlP51174 430 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ugt2b36Q3UEP4 530 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dag1Q62165 893 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1065Q7TR70 313 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Klhl42Q8BFQ9 493 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Wdr92Q8BGF3 357 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc27a4Q91VE0 643 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tnfrsf22Q9ER62 198 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 ItgaxQ9QXH4 1169 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Bex2Q9WTZ8 129 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zfp937A2ANU7 503 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cped1B2RX70 1026 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 S100a2J3QMC7 104 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Bhlhe40O35185 411 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 CtslP06797 334 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gnao1P18872 354 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Oprd1P32300 372 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 DckP43346 260 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Il18P70380 192 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 EvlP70429 414 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr629Q0VBH3 314 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fam196aQ3USH1 422 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Dcaf12l2Q8BGW4 469 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Aspscr1Q8VBT9 550 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr61Q8VGM2 311 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zcchc12Q9CZA5 402 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Klhl1Q9JI74 751 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 1700023F06RikA2AB62 382 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Slc22a1O08966 556 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ccl4P14097 92 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Bmp6P20722 510 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Apex1P28352 317 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tango2P54797 276 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Smad4P97471 551 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Foxred1Q3TQB2 487 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cyp4b1Q64462 511 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 C2cd4bQ80XU5 340 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Krt33aQ8K0Y2 404 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tinagl1Q99JR5 466 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fundc2Q9D6K8 151 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Mfap5Q9QZJ6 164 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pex14Q9R0A0 376 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cd320Q9Z1P5 260 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zgrf1Q0VGT4 1863 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P01670 111 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P01671 111 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P01672 111 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 En1P09065 401 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Hmgn1P18608 96 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Rack1P68040 317 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 CstbQ62426 98 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ckmt2Q6P8J7 419 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Lrit2Q6PFC5 549 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Stk-ps2Q8C0V7 499 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1423Q8VFV0 310 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ddit4lQ8VHZ5 193 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Pex16Q91XC9 336 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Smurf1Q9CUN6 731 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Eci2Q9WUR2 391 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cdh20Q9Z0M3 801 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Cela3aA2A9U8 283 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr1215A3KGY3 312 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr190K7N5T5 307 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 EdaO54693 391 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 P2ry2P35383 373 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Tfb2mQ3TL26 396 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gdpgp1Q3TLS3 386 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Ldoc1Q7TPY9 151 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Fbxw13Q8BI57 466 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 MaelQ8BVN9 434 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Znf385bQ8BXJ8 482 aaKnown RBP11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Olfr644Q8VH21 314 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zcchc14Q8VIG0 956 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Acot7Q91V12 381 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Siglec5Q920G3 569 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Sphk2Q9JIA7 617 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 NmuQ9QXK8 174 aa11.2□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Gm7682A0A0J9YUM1 481 aa11.19□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn2r98E9PZ56 857 aa11.19□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Zfp105G3X9I0 524 aa11.19□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Vmn1r25H3BLP0 302 aa11.19□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Capn1O35350 713 aa11.19□□□□□ -0.62
Pcif1-201ENSMUST00000041643 Brd7O88665 651 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms