RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 ElocP83940 112 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 GaltQ03249 379 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Kcnip4Q6PHZ8 250 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 C8bQ8BH35 589 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nceh1Q8BLF1 408 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ubr7Q8BU04 425 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Steap3Q8CI59 488 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Clic3Q9D7P7 237 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Lpar3Q9EQ31 354 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Thsd1Q9JM61 851 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 TprF6ZDS4 2431 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ptpn22P29352 802 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Idh3gP70404 393 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nr4a2Q06219 598 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gipc3Q8R5M0 297 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1351Q8VGU6 319 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Dennd2dQ91VV4 469 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 PclafQ9CQX4 110 aaKnown RBP15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 CbfbQ08024 187 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm853Q3UNZ2 425 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1463Q7TQR3 310 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1101Q7TR59 310 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rab39aQ8BHD0 217 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ccdc58Q8R3Q6 144 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn2r-ps130A0A140T8U3 855 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1318Q7TQW6 320 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1115Q7TR53 326 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Atg4bQ8BGE6 393 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Il17cQ8K4C5 194 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fam110cQ8VE94 421 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1317Q8VF84 316 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1423Q8VFV0 310 aa15.81■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Upp1P52624 311 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Shc2Q8BMC3 573 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cd207Q8VBX4 331 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc41a3Q921R8 488 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Moap1Q9ERH6 352 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tm9sf3Q9ET30 587 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sgk2Q9QZS5 367 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn2r95L7N274 845 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Chrnb1P09690 501 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pax7P47239 503 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Hif3aQ0VBL6 662 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gfod1Q3UHD2 390 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr461Q8VF30 313 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gdpd3Q99LY2 330 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 SpdefQ9WTP3 325 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Map2k5Q9WVS7 448 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 B4galt2Q9Z2Y2 369 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Commd6Q3V4B5 87 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Brinp1Q920P3 760 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Bcl7bQ921K9 202 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc15a1Q9JIP7 709 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mrpl39Q9JKF7 336 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sema4fQ9Z123 777 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn1r55E9Q8I6 310 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 TazI7HJS2 263 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Garem2Q6PAJ3 880 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 SynbQ8BI41 618 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Mrgpra5Q91ZC7 304 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rab4bQ91ZR1 213 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rab28Q99KL7 221 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Spo11Q9WTK8 396 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn1r204I7HIK1 302 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 P03987 398 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Hcrtr1P58307 416 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Slc30a2Q2HJ10 371 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Krtcap2Q5RL79 136 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Fads6Q80UG1 342 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Sit1Q8C503 180 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Vmn1r215Q8R264 300 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr1043Q8VFK4 314 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr120Q8VFQ2 330 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 AdprmQ99KS6 340 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cers4Q9D6J1 393 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Rsc1a1Q9ER99 582 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Olfr605E9Q838 314 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cacng2O88602 323 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Adamts19P59509 1210 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ankrd28Q505D1 1053 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Kctd20Q8CDD8 419 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Pla2g15Q8VEB4 412 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gpr146Q99LE2 333 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 C6E9Q6D8 931 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Zdhhc18Q5Y5T2 380 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Cyp3a16Q64481 504 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Plekhn1Q8C886 359 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Ubox5Q925F4 539 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tmem81Q9D5K1 259 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 AllcQ9JHX6 414 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 ArntlQ9WTL8 632 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Frem3Q5H8B9 2123 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Gm4924A0A1B0GR71 966 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 A0A1W2P799 418 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Nhsl2B1AXH1 854 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Acbd4E9Q289 327 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Igfbp6P47880 238 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 SmoP56726 793 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 Tbpl1P62340 186 aa15.8■□□□□ 0.12
Ccdc88a-201ENSMUST00000040182 HykkQ5U5V2 376 aa15.8■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms