RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Sox19Q62249 55 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Fbxo5Q7TSG3 421 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Fbxl21Q8BFZ4 434 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Pck2Q8BH04 640 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Zc3h14Q8BJ05 735 aaKnown RBP11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Unc5aQ8K1S4 898 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Ccm2Q8K2Y9 453 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr769Q8K501 312 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Vps25Q9CQ80 176 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Slit1Q80TR4 1531 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Cntnap2Q9CPW0 1332 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Trbv20A0A0B4J1H5 111 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr376E9Q4M1 320 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 B3galt1O54904 326 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Garem1Q3UFT3 876 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Nxt2Q3UNA4 142 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Slc47a2Q3V050 573 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Plk5Q4FZD7 595 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 LppQ8BFW7 613 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Tmem268Q8R239 342 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Vmn1r22Q8R2D1 302 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Emid1Q91VF5 444 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Tktl1Q99MX0 595 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Dnajb2Q9QYI5 324 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Gpr155A2AWR3 868 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Arhgap40E9Q6X9 672 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr773F6VS78 311 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Gm14139F6ZS36 494 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Ccrl2O35457 360 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Capns1O88456 269 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 CtsdP18242 410 aaKnown RBP11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Slc12a3P59158 1002 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rps26P62855 115 aaKnown RBP11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Ranbp3lQ6PDH4 491 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Kirrel2Q7TSU7 700 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Arhgap19Q8BRH3 494 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 4921517D22RikQ8CET0 269 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Slc24a4Q8CGQ8 622 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Piwil4Q8CGT6 848 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Neto1Q8R4I7 533 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr998Q8VF76 314 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr401Q8VFX6 315 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr772Q8VGC5 311 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Maf1Q9D0U6 258 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Ccdc54Q9DAL3 329 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Pabpc4lG5E8X2 370 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr1218L7MU54 311 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Scrg1O88745 98 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 H2-Q10P01898 325 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Hbb-bh0P04443 147 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Prkar2aP12367 401 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 StradaQ3UUJ4 431 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Patz1Q5NBY9 687 aaKnown RBP11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Sim1Q61045 765 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Cr1lQ64735 483 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 PimregQ8BFY7 231 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Osbpl11Q8CI95 751 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Vmn1r215Q8R264 300 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Il36gQ8R460 164 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr669Q8VGU9 317 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Pdzd11Q9CZG9 140 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Wdr89Q9D0R9 386 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Slc6a14Q9JMA9 638 aa11.66□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Pm20d2A3KG59 431 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rnaset2aC0HKG5 259 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rnaset2bC0HKG6 259 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Vmn1r68E9Q0V3 319 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Hdac3O88895 424 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 P06335 190 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Nme1P15532 152 aaKnown RBP11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Cd63P41731 238 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Fabp7P51880 132 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Klhl21Q3U410 597 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Nlgn2Q69ZK9 836 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr270Q7TS19 314 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Itln1bQ80ZA0 313 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Kiaa0895lQ810A5 467 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Unc5dQ8K1S2 956 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 St8sia6Q8K4T1 398 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr342Q8VGK7 312 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Eral1Q9CZU4 437 aaKnown RBP11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Hint2Q9D0S9 163 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 SerhlQ9EPB5 311 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Gm3676D3Z236 184 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Vmn2r94E9PZK8 818 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Gm3573L7N292 184 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Cldn4O35054 210 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 AldoaP05064 364 aaKnown RBP11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rfx3P48381 749 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 ptchd1Q14B62 888 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Six1Q62231 284 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Kir3dl2Q673W2 388 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr1197Q7TR13 314 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Itpk1Q8BYN3 419 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Bpifb2Q8C1E1 462 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Sec14l4Q8R0F9 403 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Fmo4Q8VHG0 560 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Sytl3Q99N48 607 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Tcam1Q99NB3 548 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Ndufs4Q9CXZ1 175 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms