RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Vmn2r98E9PZ56 857 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Hax1O35387 280 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 P04214 136 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 PrnpP04925 254 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ugt2b36Q3UEP4 530 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Eri1Q7TMF2 345 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Znf689Q8BKK5 500 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Neu4Q8BZL1 478 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Kctd2Q8CEZ0 266 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Unc5dQ8K1S2 956 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr1020Q8VFK7 317 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Asb16Q8VHS5 453 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cstf1Q99LC2 431 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Timm22Q9CQ85 194 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 ItpaQ9D892 198 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Stxbp1O08599 594 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Yme1l1O88967 715 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Mtnd5P03921 607 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Map2k4P47809 397 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Prkg2Q61410 762 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Meig1Q61845 88 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Arhgef4Q7TNR9 484 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Atp6v1hQ8BVE3 483 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Q91W34 466 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Mrpl15Q9CPR5 295 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rnf32Q9JIT1 368 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ilf3Q9Z1X4 898 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm28557A0A087WQQ0 336 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm4924A0A1B0GR71 966 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm13271B1AYH9 182 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Otud4B2RRE7 1107 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm20671F6TVX7 576 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ccrl2O35457 360 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Srp54P14576 504 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Hmgn1P18608 96 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Itgb7P26011 806 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cct3P80318 545 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Adra1aP97718 466 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ctnnb1Q02248 781 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rspo2Q8BFU0 243 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cnot2Q8C5L3 540 aaKnown RBP15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Sirt5Q8K2C6 310 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Tmem268Q8R239 342 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ffar2Q8VCK6 330 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 PpcsQ8VDG5 311 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr551Q8VG23 315 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Cts7Q91ZF2 331 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 3300002I08RikQ9CXH3 147 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Tor3aQ9ER38 385 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Sertad3Q9ERC3 197 aa15.28■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm7929A0A286YDV3 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Slc9a6A1L3P4 702 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Zfp993A2A8V4 313 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm21977F6U3N7 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm8247F6VRJ8 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm8005F6YKY3 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm3015F6ZAP6 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm8212F6ZMY5 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm7954F7BAX1 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm8138F7BY56 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm8232F7CFJ3 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm17079F7D8Y4 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 9330182O14RikJ3QNB2 140 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm8165L7N218 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm8122L7N2C7 213 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Gm17078M0QW51 211 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Phxr1P15973 60 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Hoxb9P20615 250 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 OcmP51879 109 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 SnrpnP63163 240 aaKnown RBP15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Slc39a9Q8BFU1 308 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Serpina11Q8CIE0 424 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Spin4Q8K1L2 249 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Scara5Q8K299 491 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Zfyve21Q8VCM3 234 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Olfr643Q8VGY1 314 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Clp1Q99LI9 425 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Spz1Q99MY0 378 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Jph1Q9ET80 660 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Upk3aQ9JKX8 287 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Ca5bQ9QZA0 317 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Rasal1Q9Z268 799 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 OtofQ9ESF1 1997 aa15.27■□□□□ 0.04
Trim28-201ENSMUST00000005705 Enthd1E9Q1Z2 618 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm5571P01639 130 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ubl4aP21126 157 aaKnown RBP15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 CatP24270 527 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 TtkP35761 856 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 TtlP38585 377 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Tbx1P70323 479 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Commd6Q3V4B5 87 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Snap91Q61548 901 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Alg8Q6P8H8 526 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr406Q7TRX0 323 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 C1raQ8CG16 707 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Adam4Q8CGQ2 763 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Agfg1Q8K2K6 561 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ccm2Q8K2Y9 453 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ncbp2Q9CQ49 156 aaKnown RBP15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cers5Q9D6K9 414 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 20.5 ms