RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 BBS1Q8NFJ9 593 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 FAM213AQ9BRX8 229 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 CNPY3Q9BT09 278 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 SLC25A39Q9BZJ4 359 aaPredicted RBP2.94□□□□□ -1.94
CCDC7-216ENST00000640058 ABCG4Q9H172 646 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 GLT8D2Q9H1C3 349 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 NANOGQ9H9S0 305 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 AKAP7Q9P0M2 348 aaPredicted RBP2.94□□□□□ -1.94
CCDC7-216ENST00000640058 PURGQ9UJV8 347 aaKnown RBP2.94□□□□□ -1.94
CCDC7-216ENST00000640058 TDRKHQ9Y2W6 561 aaKnown RBP2.94□□□□□ -1.94
CCDC7-216ENST00000640058 MRPS2Q9Y399 296 aaKnown RBP2.94□□□□□ -1.94
CCDC7-216ENST00000640058 GPRASP1Q5JY77 1395 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 ARID1AO14497 2285 aa2.94□□□□□ -1.94
CCDC7-216ENST00000640058 LRIT2A6NDA9 550 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 TLR4O00206 839 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 CHEK1O14757 476 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 HTATSF1O43719 755 aaKnown RBP2.93□□□□□ -1.94
CCDC7-216ENST00000640058 IGSF6O95976 241 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 CCNE1P24864 410 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 NF2P35240 595 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 NLRP11P59045 1033 aaKnown RBP2.93□□□□□ -1.94
CCDC7-216ENST00000640058 ZNF45Q02386 682 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 EBI3Q14213 229 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 PKN2Q16513 984 aaKnown RBP2.93□□□□□ -1.94
CCDC7-216ENST00000640058 CWC27Q6UX04 472 aaKnown RBP2.93□□□□□ -1.94
CCDC7-216ENST00000640058 DLEU7Q6UYE1 221 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 IL34Q6ZMJ4 242 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 BNIPLQ7Z465 357 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 ZNF619Q8N2I2 560 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 MLKLQ8NB16 471 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 ADAMTS16Q8TE57 1224 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 DLX4Q92988 240 aaPredicted RBP2.93□□□□□ -1.94
CCDC7-216ENST00000640058 STARD4Q96DR4 205 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 DEFB118Q96PH6 123 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 IL4I1Q96RQ9 567 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 NAP1L3Q99457 506 aaPredicted RBP2.93□□□□□ -1.94
CCDC7-216ENST00000640058 SPXQ9BT56 116 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 ABCG8Q9H221 673 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 THAP9Q9H5L6 903 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 ANO10Q9NW15 660 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 ELOVL2Q9NXB9 296 aa2.93□□□□□ -1.94
CCDC7-216ENST00000640058 NACAE9PAV3 2078 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 TRBV7-9A0A0J9YWB2 115 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 TCP11X1B4DZS4 312 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 MMP23AO75900 390 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 CXCL10P02778 98 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 HPNP05981 417 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 PGK2P07205 417 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 HIST1H2AGP0C0S8 130 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-216ENST00000640058 AREGP15514 252 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 AHCYP23526 432 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 NSFP46459 744 aaKnown RBP2.92□□□□□ -1.94
CCDC7-216ENST00000640058 PITPNBP48739 271 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 PPOXP50336 477 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 SGSHP51688 502 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 CNN1P51911 297 aaKnown RBP2.92□□□□□ -1.94
CCDC7-216ENST00000640058 CASP9P55211 416 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 LINC00315P59091 139 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 NOP14P78316 857 aaKnown RBP2.92□□□□□ -1.94
CCDC7-216ENST00000640058 CAMK4Q16566 473 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 ZNF57Q68EA5 555 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-216ENST00000640058 DPY19L2P2Q6ZN68 376 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 TOM1L2Q6ZVM7 507 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 PARGQ86W56 976 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-216ENST00000640058 CHCHD4Q8N4Q1 142 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 OR8H1Q8NGG4 311 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 OR52E1Q8NGJ3 308 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 URGCPQ8TCY9 931 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 HIST1H2ACQ93077 130 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 NOL4LQ96MY1 436 aaPredicted RBP2.92□□□□□ -1.94
CCDC7-216ENST00000640058 ABCC9O60706 1549 aa2.92□□□□□ -1.94
CCDC7-216ENST00000640058 IGLV3-16A0A075B6K0 115 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 H3BMH7 237 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 LRP3O75074 770 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 RFC2P35250 354 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 HNRNPA3P51991 378 aaKnown RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 RPL32P62910 135 aaKnown RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 GFPT1Q06210 699 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 PARP10Q53GL7 1025 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 PRAMEF7Q5VXH5 474 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 RAB12Q6IQ22 244 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 FRA10AC1Q70Z53 315 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 RANBP3LQ86VV4 465 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 CSNK1A1LQ8N752 337 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 MRPL43Q8N983 215 aaKnown RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 EXOC6Q8TAG9 804 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 SLC13A3Q8WWT9 602 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 SRSF12Q8WXF0 261 aaKnown RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 TMEM37Q8WXS4 190 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 CCDC47Q96A33 483 aaKnown RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 ZNF560Q96MR9 790 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 SPATA13Q96N96 652 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 RUFY1Q96T51 708 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 NICN1Q9BSH3 213 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 TEX13AQ9BXU3 409 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 TRPV6Q9H1D0 765 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 OR51J1Q9H342 316 aa2.91□□□□□ -1.94
CCDC7-216ENST00000640058 PATZ1Q9HBE1 687 aaKnown RBP2.91□□□□□ -1.94
CCDC7-216ENST00000640058 CYTL1Q9NRR1 136 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms