RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 DSN1Q9H410 356 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 EGLN3Q9H6Z9 239 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 C8orf4Q9NR00 106 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 FGF21Q9NSA1 209 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 WDR70Q9NW82 654 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GPR83Q9NYM4 423 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 TVP23BQ9NYZ1 205 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NLGN3Q9NZ94 848 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 DNAJC27Q9NZQ0 273 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 NDRG4Q9ULP0 352 aaKnown RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 C19orf53Q9UNZ5 99 aaPredicted RBP3.2□□□□□ -1.9
LIG4-205ENST00000614526 GPR52Q9Y2T5 361 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 SNX5Q9Y5X3 404 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 GMEB1Q9Y692 573 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 LRP4O75096 1905 aa3.2□□□□□ -1.9
LIG4-205ENST00000614526 A0A087WUU8 490 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 LILRA5A6NI73 299 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 DUXAA6NLW8 204 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 AP3D1O14617 1153 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 WBP4O75554 376 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 TIAF1O95411 115 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 IGKV1D-16P01601 117 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 MT-ND2P03891 347 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 RPLP0P05388 317 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 LCKP06239 509 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 HSMCR30P0CW71 290 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 GLB1P16278 677 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SLC5A2P31639 672 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CLDN6P56747 220 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CCL7P80098 99 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 HSD11B2P80365 405 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 EMX1Q04741 257 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 EPS8Q12929 822 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CEBPEQ15744 281 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PLK5Q496M5 336 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 FLYWCH1Q4VC44 716 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TRIM61Q5EBN2 209 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PDZK1Q5T2W1 519 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 MRPL2Q5T653 305 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 PHF19Q5T6S3 580 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 BROXQ5VW32 411 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PGBD2Q6P3X8 592 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 B3GLCTQ6Y288 498 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF574Q6ZN55 896 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF836Q6ZNA1 936 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PTCHD4Q6ZW05 846 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF605Q86T29 641 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PLXDC1Q8IUK5 500 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PEX5LQ8IYB4 626 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TCEANCQ8N8B7 351 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TMEM255BQ8WV15 326 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 APH1BQ8WW43 257 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 HDAC2Q92769 488 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 EDAQ92838 391 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CNDP2Q96KP4 475 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 TRNT1Q96Q11 434 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 SPATA5L1Q9BVQ7 753 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 FAM192AQ9GZU8 254 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 AKIRIN1Q9H9L7 192 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 APMAPQ9HDC9 416 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 MAN2C1Q9NTJ4 1040 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZSCAN32Q9NX65 697 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 KLHL28Q9NXS3 571 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 MKL2Q9ULH7 1088 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SLC7A7Q9UM01 511 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF232Q9UNY5 417 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ZNF443Q9Y2A4 671 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 POFUT2Q9Y2G5 429 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 AHCTF1Q8WYP5 2266 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SMIM31A0A1B0GVY4 71 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 A0A1W2PPW3 197 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 A0A1W2PQM1 296 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 C19orf67A6NJJ6 358 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 C17orf105B2RV13 164 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TLX2O43763 284 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 NUDT21O43809 227 aaKnown RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 CTNSO60931 367 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 STX11O75558 287 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 KCNK2O95069 426 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 BMP10O95393 424 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 THY1P04216 161 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ATP1B1P05026 303 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 STSP08842 583 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 SLC35E2P0CK97 266 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ITGAMP11215 1152 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CCNA2P20248 432 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CBLP22681 906 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 TGFBR1P36897 503 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 GABRA4P48169 554 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 ALDH3B2P48448 385 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 EMDP50402 254 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CCR4P51679 360 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 EFNA3P52797 238 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 CRISP1P54107 249 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 UGT2B15P54855 530 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 POU6F2P78424 691 aaPredicted RBP3.19□□□□□ -1.9
LIG4-205ENST00000614526 DAB2P98082 770 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 PSG6Q00889 435 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 FAM53BQ14153 422 aa3.19□□□□□ -1.9
LIG4-205ENST00000614526 GNA13Q14344 377 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms