RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CPA2P48052 419 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 RFX3P48380 749 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 CCT5P48643 541 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 MRPS22P82650 360 aaKnown RBP12.98□□□□□ -0.33
VMP1-206ENST00000587945 SORDQ00796 357 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 CCDC153Q494R4 210 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 CYP27C1Q4G0S4 372 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 ANKRD26P1Q6NSI1 321 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 GRAMD2AQ8IUY3 354 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 UBQLNLQ8IYU4 475 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 OR2L13Q8N349 312 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 FADS6Q8N9I5 356 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 OR2M3Q8NG83 312 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 OR5M1Q8NGP8 315 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 ELP4Q96EB1 424 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 UCN2Q96RP3 112 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 CXXC4Q9H2H0 198 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 RRAGDQ9NQL2 400 aaPredicted RBP12.98□□□□□ -0.33
VMP1-206ENST00000587945 DDX18Q9NVP1 670 aaKnown RBP12.98□□□□□ -0.33
VMP1-206ENST00000587945 OXSMQ9NWU1 459 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 GALNT8Q9NY28 637 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 GRID1Q9ULK0 1009 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 MRPS18CQ9Y3D5 142 aaKnown RBP12.98□□□□□ -0.33
VMP1-206ENST00000587945 PRRC2AP48634 2157 aaKnown RBP12.98□□□□□ -0.33
VMP1-206ENST00000587945 FREM3P0C091 2139 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 GXYLT2A0PJZ3 443 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 H0YC42 278 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 SEC22BO75396 215 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 TNFSF13O75888 250 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 PSMG1O95456 288 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 UROSP10746 265 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 HK1P19367 917 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 CHMP24386 653 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 GABRA3P34903 492 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 TPD52P55327 224 aaPredicted RBP12.97□□□□□ -0.33
VMP1-206ENST00000587945 DSCR4P56555 118 aaPredicted RBP12.97□□□□□ -0.33
VMP1-206ENST00000587945 PSPHP78330 225 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 KIAA0040Q15053 153 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 POU4F3Q15319 338 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 RAET1LQ5VY80 246 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 ZNF551Q7Z340 670 aaPredicted RBP12.97□□□□□ -0.33
VMP1-206ENST00000587945 MARCH3Q86UD3 253 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 C10orf107Q8IVU9 208 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 C4orf33Q8N1A6 199 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 FAM76AQ8TAV0 307 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 EPS8L3Q8TE67 593 aaKnown RBP12.97□□□□□ -0.33
VMP1-206ENST00000587945 CIDECQ96AQ7 238 aaPredicted RBP12.97□□□□□ -0.33
VMP1-206ENST00000587945 ZFP3Q96NJ6 502 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 YIPF4Q9BSR8 244 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 TMUB1Q9BVT8 246 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 EQTNQ9NQ60 294 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 FIS1Q9Y3D6 152 aa12.97□□□□□ -0.33
VMP1-206ENST00000587945 A0A1W2PNV4 684 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 A8MXE2 369 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 H3BQF6 201 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 COPEO14579 308 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 AKAP10O43572 662 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 HCRTR2O43614 444 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 GMFGO60234 142 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 IL33O95760 270 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 IGKV1D-16P01601 117 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 CD99P14209 185 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 KRT4P19013 534 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 SUCLG1P53597 346 aaKnown RBP12.96□□□□□ -0.33
VMP1-206ENST00000587945 CLDN15P56746 228 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 HSPB3Q12988 150 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 BCL2A1Q16548 175 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 DECR1Q16698 335 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 ZNF385BQ569K4 471 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 LIPMQ5VYY2 423 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 P4HA3Q7Z4N8 544 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 TDRPQ86YL5 185 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 OR2T11Q8NH01 316 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 DUSP19Q8WTR2 217 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 FIG4Q92562 907 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 PIK3R3Q92569 461 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 DTNBP1Q96EV8 351 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 LMF2Q9BU23 707 aaKnown RBP12.96□□□□□ -0.33
VMP1-206ENST00000587945 LRTM1Q9HBL6 345 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 Q9N2J8 555 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 WBP11Q9Y2W2 641 aaKnown RBP12.96□□□□□ -0.33
VMP1-206ENST00000587945 ZNF337Q9Y3M9 751 aa12.96□□□□□ -0.33
VMP1-206ENST00000587945 ZNF469Q96JG9 3925 aaPredicted RBP12.95□□□□□ -0.34
VMP1-206ENST00000587945 MED13LQ71F56 2210 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 EXPH5Q8NEV8 1989 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 SHISA8B8ZZ34 492 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 SLC28A1O00337 649 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 AZIN1O14977 448 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 SEC14L5O43304 696 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 SMNDC1O75940 238 aaKnown RBP eCLIP12.95□□□□□ -0.34
VMP1-206ENST00000587945 SLITRK5O94991 958 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 UTS2O95399 124 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 PEPDP12955 493 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 CPOXP36551 454 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 NAA20P61599 178 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 ZNHIT3Q15649 155 aaPredicted RBP12.95□□□□□ -0.34
VMP1-206ENST00000587945 VWA1Q6PCB0 445 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 PAMR1Q6UXH9 720 aa12.95□□□□□ -0.34
VMP1-206ENST00000587945 APOOLQ6UXV4 268 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms