RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 RAB35Q15286 201 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 MS4A13Q5J8X5 152 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 DCST2Q5T1A1 773 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 SEL1L2Q5TEA6 688 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 OLFML2AQ68BL7 652 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 SLC39A4Q6P5W5 647 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 HACD2Q6Y1H2 254 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 ADAMTSL5Q6ZMM2 481 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 FADS6Q8N9I5 356 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 STKLD1Q8NE28 680 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 OR10T2Q8NGX3 314 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 FAM222BQ8WU58 562 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 TFB1MQ8WVM0 346 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 ITLN1Q8WWA0 313 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 TADA1Q96BN2 335 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 UPRTQ96BW1 309 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 ZBED6CLQ96FA7 236 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 HPDLQ96IR7 371 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 RPP25Q9BUL9 199 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 TPPP3Q9BW30 176 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 TBC1D10AQ9BXI6 508 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 MRPL13Q9BYD1 178 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 NFKBIZQ9BYH8 718 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 PUS3Q9BZE2 481 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 COQ10BQ9H8M1 238 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 ADGRL4Q9HBW9 690 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 TIGARQ9NQ88 270 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF446Q9NWS9 450 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 CLEC5AQ9NY25 188 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 RDH8Q9NYR8 311 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 MFHAS1Q9Y4C4 1052 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 RNF115Q9Y4L5 304 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 STYXL1Q9Y6J8 313 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 DDX49Q9Y6V7 483 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 CLDN5O00501 218 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 IMPA2O14732 288 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 LRRTM2O43300 516 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 LANCL1O43813 399 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 LCMT2O60294 686 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 WNT2P09544 360 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 SDC1P18827 310 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 ADSSP30520 456 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF33BQ06732 778 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 TFDP1Q14186 410 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 ABRAXAS2Q15018 415 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 PPP1R3AQ16821 1122 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 LGSNQ5TDP6 509 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 MEDAGQ5VYS4 303 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 LEMD1Q68G75 181 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 BTNL3Q6UXE8 466 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 Q7L0L9 218 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 LRRC70Q7Z2Q7 622 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 SERINC5Q86VE9 423 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 SLC22A18ASQ8N1D0 253 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 RFESDQ8TAC1 157 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 ART4Q93070 314 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 ADIPOR1Q96A54 375 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 C11orf24Q96F05 449 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 C1orf147Q96MC9 270 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 TSGA13Q96PP4 275 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 EXOSC3Q9NQT5 275 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 AGPAT5Q9NUQ2 364 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 FAM120CQ9NX05 1096 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 BARX2Q9UMQ3 279 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 B9D1Q9UPM9 204 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 CSAG2Q9Y5P2 127 aa2.92□□□□□ -1.94
SMCHD1-209ENST00000583441 CACNA1FO60840 1977 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 GSAPA4D1B5 854 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 CPLX1O14810 134 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 JAK2O60674 1132 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 CRLF1O75462 422 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 OR4F21O95013 312 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 CSF2P04141 144 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 IGFBP1P08833 259 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 FAM200BP0CF97 657 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 GATA1P15976 413 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 ACADSP16219 412 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 ZFP36L1Q07352 338 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 KLHL30Q0D2K2 578 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 OVGP1Q12889 678 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 TRIP10Q15642 601 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 UBE2V2Q15819 145 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 LPAL2Q16609 132 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 DNAJC21Q5F1R6 531 aaKnown RBP2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 PNCKQ6P2M8 343 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 SCYL2Q6P3W7 929 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 CBLN3Q6UW01 205 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF600Q6ZNG1 722 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 ANKRD37Q7Z713 158 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 LHFPL4Q7Z7J7 247 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 PARGQ86W56 976 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 HIPK1Q86Z02 1210 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 VN1R17PQ8TDU5 208 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 AGAP11Q8TF27 550 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 THRSPQ92748 146 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 DNAJA3Q96EY1 480 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 AKR1E2Q96JD6 320 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 GSDMCQ9BYG8 508 aa2.91□□□□□ -1.94
SMCHD1-209ENST00000583441 COMMD4Q9H0A8 199 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms