RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 A3GALT2U3KPV4 340 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MYO9BQ13459 2157 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MYO10Q9HD67 2058 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 A0A087WUU8 490 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 IGHV1OR15-9A0A0B4J2B8 117 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 A0A1W2PS29 197 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 AGAP5A6NIR3 686 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TTC36A6NLP5 189 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 M0R3H8 397 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TLR4O00206 839 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 OR10H3O60404 316 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 FCMRO60667 390 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TPST2O60704 377 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CTNSO60931 367 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CNOT3O75175 753 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 STX11O75558 287 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 UGT2B17O75795 530 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 NKX2-2O95096 273 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 DBIP07108 87 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ALOX5P09917 674 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 POU2F1P14859 743 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 NME1P15531 152 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF182P17025 639 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 S1PR1P21453 382 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 RPS4Y1P22090 263 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 MMP11P24347 488 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CD38P28907 300 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ALDH4A1P30038 563 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 C21orf33P30042 268 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 IFNA8P32881 189 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 GALNSP34059 522 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TGFBR2P37173 567 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 STAT5AP42229 794 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 STT3AP46977 705 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 GSSP48637 474 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 IDH2P48735 452 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 BMXP51813 675 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 UGT2B15P54855 530 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 RAB38P57729 211 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 SNRPNP63162 240 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 SKP1P63208 163 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 EEF1A1P68104 462 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 OLR1P78380 273 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 IGLV3-21P80748 117 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 SIM1P81133 766 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 RHAGQ02094 409 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ZP2Q05996 745 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ST3GAL3Q11203 375 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 BNIP3Q12983 259 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TSPAN31Q12999 210 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TARDBPQ13148 414 aaKnown RBP eCLIP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 AQP6Q13520 282 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 FAM53BQ14153 422 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 GAS6Q14393 721 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 SPCS2Q15005 226 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 LARS2Q15031 903 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ELOCQ15369 112 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 PRICKLE4Q2TBC4 344 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 GARNL3Q5VVW2 1013 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TYW3Q6IPR3 259 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ARMC6Q6NXE6 501 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 DEF8Q6ZN54 512 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 FRRS1Q6ZNA5 592 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 Q6ZS52 159 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 RASSF6Q6ZTQ3 369 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 AHSA2Q719I0 299 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 C16orf62Q7Z3J2 963 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 SLC46A3Q7Z3Q1 461 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 P2RY8Q86VZ1 359 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 GKN2Q86XP6 184 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 PEX5LQ8IYB4 626 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 RNF113BQ8IZP6 322 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CA13Q8N1Q1 262 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CLIP4Q8N3C7 705 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 STX19Q8N4C7 294 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CAMKK1Q8N5S9 505 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 CLDN22Q8N7P3 220 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 C7orf57Q8NEG2 295 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 B3GNT7Q8NFL0 401 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TSTD1Q8NFU3 115 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 OR4K5Q8NGD3 323 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 OR10G6Q8NH81 332 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 MAFAQ8NHW3 353 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 VANGL1Q8TAA9 524 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 PATE1Q8WXA2 126 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ACOT11Q8WXI4 607 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 DIO2Q92813 273 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 HPS1Q92902 700 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 BORCS5Q969J3 196 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 SLC35B4Q969S0 331 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ANKRD9Q96BM1 317 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 TCTN2Q96GX1 697 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 YIPF4Q9BSR8 244 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 DCUN1D5Q9BTE7 237 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ITPAQ9BY32 194 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 POLDIP3Q9BY77 421 aaKnown RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.02□□□□□ -1.61
SF3B3-213ENST00000569687 ZNF350Q9GZX5 532 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 PRDM6Q9NQX0 595 aa5.02□□□□□ -1.61
SF3B3-213ENST00000569687 FBXO8Q9NRD0 319 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms