RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 A0A087WXM4 84 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 DPPA5A6NC42 116 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 FAM227AF5H4B4 570 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 TERTO14746 1132 aaKnown RBP13.61□□□□□ -0.23
COMMD4-221ENST00000567935 LGI1O95970 557 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 THBS1P07996 1170 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 NELFEP18615 380 aaKnown RBP13.61□□□□□ -0.23
COMMD4-221ENST00000567935 PRKACGP22612 351 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 IFNA8P32881 189 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 OR1E2P47887 323 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 DAPP51397 102 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 NR1H2P55055 460 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 CDH12P55289 794 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 MGAT2Q10469 447 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 STX4Q12846 297 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 SLC13A2Q13183 592 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 ZIK1Q3SY52 487 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-221ENST00000567935 AMZ1Q400G9 498 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 EIPR1Q53HC9 387 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 RBM48Q5RL73 367 aaKnown RBP13.61□□□□□ -0.23
COMMD4-221ENST00000567935 HES3Q5TGS1 186 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 AP1ARQ63HQ0 302 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 TMEM71Q6P5X7 295 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 GALNT12Q8IXK2 581 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 TAGAPQ8N103 731 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF786Q8N393 782 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 TSPAN14Q8NG11 270 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 MMABQ96EY8 250 aaPredicted RBP13.61□□□□□ -0.23
COMMD4-221ENST00000567935 SLC35A4Q96G79 324 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 APOL4Q9BPW4 351 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 YIPF4Q9BSR8 244 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 NDC1Q9BTX1 674 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 GABARAPL3Q9BY60 117 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF556Q9HAH1 456 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 ACER3Q9NUN7 267 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 HCN3Q9P1Z3 774 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 BLOC1S6Q9UL45 172 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 TMCC3Q9ULS5 477 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF232Q9UNY5 417 aa13.61□□□□□ -0.23
COMMD4-221ENST00000567935 SMIM31A0A1B0GVY4 71 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 EME2A4GXA9 379 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PRAMEF25A6NGN4 478 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 TMEM150CB9EJG8 249 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 H3BMH7 237 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 BCKDKO14874 412 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PCDHGA12O60330 932 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 CCNB2O95067 398 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 RECKO95980 971 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 CTSBP07858 339 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PABPC4LP0CB38 370 aaKnown RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 GP1BBP13224 206 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 TNFRSF1BP20333 461 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 CSF2RBP32927 897 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 MAP3K8P41279 467 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 STT3AP46977 705 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 GCGRP47871 477 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 ID2Q02363 134 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PPP1R8Q12972 351 aaKnown RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 LARS2Q15031 903 aaKnown RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 ZNHIT3Q15649 155 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 ZNF691Q5VV52 312 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 TCTN3Q6NUS6 607 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PEX5LQ8IYB4 626 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PARP8Q8N3A8 854 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 Q8N9G6 341 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 SLC16A11Q8NCK7 471 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 OR51Q1Q8NH59 317 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 HDAC2Q92769 488 aaKnown RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 RBM18Q96H35 190 aaKnown RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PEX11GQ96HA9 241 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 MUS81Q96NY9 551 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 DGAT2Q96PD7 388 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PITX2Q99697 317 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 SPRTNQ9H040 489 aaPredicted RBP13.6□□□□□ -0.23
COMMD4-221ENST00000567935 SAP130Q9H0E3 1048 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 CXorf21Q9HAI6 301 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 ADAP2Q9NPF8 381 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 KLHL3Q9UH77 587 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 SRPK3Q9UPE1 567 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 WDR45Q9Y484 360 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PCDHGB5Q9Y5G0 923 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 UNC13CQ8NB66 2214 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 NINQ8N4C6 2090 aa13.6□□□□□ -0.23
COMMD4-221ENST00000567935 BSNQ9UPA5 3926 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 A0A1W2PRQ8 180 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 TRIM64CA6NLI5 447 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 FAAHO00519 579 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 DSCR3O14972 297 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 PRAMEF2O60811 474 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 STX11O75558 287 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 RFPL3O75679 317 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 NKX2-2O95096 273 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 MED26O95402 600 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 CPNE6O95741 557 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 H1F0P07305 194 aaKnown RBP13.59□□□□□ -0.23
COMMD4-221ENST00000567935 ACP2P11117 423 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 PTGER1P34995 402 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 SOX18P35713 384 aa13.59□□□□□ -0.23
COMMD4-221ENST00000567935 DUSP3P51452 185 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms