RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 CUX2O14529 1486 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 A0A0U1RQV5 110 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 LCMT2O60294 686 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 JCHAINP01591 159 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 GHRP10912 638 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 IGHV1-2P23083 117 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 GDF1P27539 372 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 NOVP48745 357 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 METAP1P53582 386 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 BPIFB3P59826 476 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 NOP14P78316 857 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 IL18R1Q13478 541 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 TFDP1Q14186 410 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 UFSP1Q6NVU6 142 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 BTNL3Q6UXE8 466 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 P4HA3Q7Z4N8 544 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 CERS5Q8N5B7 392 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 OR52B4Q8NGK2 314 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 KCNK16Q96T55 309 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 CCSER1Q9C0I3 900 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 PNNQ9H307 717 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 KAT8Q9H7Z6 458 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 ACTR8Q9H981 624 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 MIEF1Q9NQG6 463 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 DUS2Q9NX74 493 aaKnown RBP3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 GDAP2Q9NXN4 497 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 VNN3Q9NY84 501 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 KLRF1Q9NZS2 232 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 MOKQ9UQ07 419 aa3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 ZNF646O15015 1829 aaPredicted RBP3.47□□□□□ -1.85
SHCBP1-206ENST00000567698 H3BTX0 84 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 LGALS8O00214 317 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 RASGRF2O14827 1237 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 P0C879 139 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 TSPAN8P19075 237 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 CYBRD1Q53TN4 286 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 BEND6Q5SZJ8 279 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 FAM120AOSQ5T036 256 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 IRGCQ6NXR0 463 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 TMEM184AQ6ZMB5 413 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 PARGQ86W56 976 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 C9orf40Q8IXQ3 194 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 ZNF525Q8N782 197 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 ARNTL2Q8WYA1 636 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 C18orf25Q96B23 403 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 DPH7Q9BTV6 452 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 TBC1D10AQ9BXI6 508 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 RAB17Q9H0T7 212 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 NGBQ9NPG2 151 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 EXOSC3Q9NQT5 275 aaKnown RBP3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 YAE1D1Q9NRH1 226 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 USP16Q9Y5T5 823 aa3.46□□□□□ -1.86
SHCBP1-206ENST00000567698 NCAPD2Q15021 1401 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 KLF18A0A0U1RQI7 1052 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 ZSCAN5BA6NJL1 495 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 WASHC1A8K0Z3 465 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 WASH3PC4AMC7 463 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 GPAA1O43292 621 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 SDC1P18827 310 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 XRCC1P18887 633 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 MAPK3P27361 379 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 RPL4P36578 427 aaKnown RBP3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 XCR1P46094 333 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 FNTAP49354 379 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 IGLV3-21P80748 117 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 NDPQ00604 133 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 ASAH1Q13510 395 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 EXOSC2Q13868 293 aaKnown RBP3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 UBE2V2Q15819 145 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 GSG1Q2KHT4 349 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 QRICH1Q2TAL8 776 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 MARC1Q5VT66 337 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 SLC22A10Q63ZE4 541 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 RAET1GQ6H3X3 334 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 C2orf66Q6UXQ4 117 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 WASH2PQ6VEQ5 465 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 RSPH1Q8WYR4 309 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 TMEM121Q9BTD3 319 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 ECT2Q9H8V3 914 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 ELOVL2Q9NXB9 296 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 ATXN10Q9UBB4 475 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 ATRXP46100 2492 aa3.45□□□□□ -1.86
SHCBP1-206ENST00000567698 LRRC30A6NM36 301 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 F8WDY8 70 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 CHADO15335 359 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 PPIHO43447 177 aaKnown RBP3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 ANXA4P09525 319 aaPredicted RBP3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 KLK2P20151 261 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 CALRP27797 417 aaKnown RBP3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 ACVR1BP36896 505 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 CD86P42081 329 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 ASMTP46597 345 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 IL9RQ01113 521 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 PUDPQ08623 228 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 CCDC92Q53HC0 331 aaPredicted RBP3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 Q7L0L9 218 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 LHFPL4Q7Z7J7 247 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 VPS36Q86VN1 386 aa3.44□□□□□ -1.86
SHCBP1-206ENST00000567698 C11orf53Q8IXP5 236 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms