RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CXorf21Q9HAI6 301 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 FAM60AQ9NP50 221 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 C14orf105Q9NVL8 296 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 NDOR1Q9UHB4 597 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 WDR45Q9Y484 360 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MMACHCQ9Y4U1 282 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 PCDHGA6Q9Y5G7 932 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MYO7AQ13402 2215 aa6.82□□□□□ -1.32
ATXN3-221ENST00000553498 MN1Q10571 1320 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SH3PXD2BA1X283 911 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 HTR3EA5X5Y0 456 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 TRIM64BA6NI03 449 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 AGAP5A6NIR3 686 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ENO4A6NNW6 628 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ZAR1LA6NP61 321 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 AP3D1O14617 1153 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 FFAR1O14842 300 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CHST10O43529 356 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 RGS10O43665 173 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 DYRK3O43781 588 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 FGF17O60258 216 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 KIAA0513O60268 411 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 OR10H2O60403 315 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 PRAMEF2O60811 474 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ADAM11O75078 769 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 TRMUO75648 421 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ALX3O95076 343 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 NKX2-2O95096 273 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 WISP1O95388 367 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 EDN3P14138 238 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 NELFEP18615 380 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 TNFRSF1BP20333 461 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 RPS4Y1P22090 263 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ALDH4A1P30038 563 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 LCN1P31025 176 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ARL4DP49703 201 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CRISP1P54107 249 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CDH15P55291 814 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SNRPGP62308 76 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 HSD11B2P80365 405 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SHC2P98077 582 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ROR2Q01974 943 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CHRNEQ04844 493 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 DUSP2Q05923 314 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 MGAT2Q10469 447 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 STX4Q12846 297 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 PPP1R8Q12972 351 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 LSAMPQ13449 338 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 TRAM2Q15035 370 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 TMEM44Q2T9K0 475 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CTU2Q2VPK5 515 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF750Q32MQ0 723 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 FGD3Q5JSP0 725 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SLC25A30Q5SVS4 291 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 LYSMD4Q5XG99 296 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 C1orf94Q6P1W5 598 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 FAM111BQ6SJ93 734 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 DEF8Q6ZN54 512 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 RANBP3LQ86VV4 465 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CMIPQ8IY22 773 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF619Q8N2I2 560 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 DEFB123Q8N688 67 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 COX18Q8N8Q8 333 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 AQP11Q8NBQ7 271 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SLC16A11Q8NCK7 471 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 BPIFB6Q8NFQ5 453 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 OR7G1Q8NGA0 311 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 OR13F1Q8NGS4 319 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 C9orf43Q8TAL5 461 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 RAB2BQ8WUD1 216 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SLC9A6Q92581 669 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 KAT2AQ92830 837 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ANKRD9Q96BM1 317 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SLC35A4Q96G79 324 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 C16orf58Q96GQ5 468 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CSF3RQ99062 836 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SDF2Q99470 211 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ELF4Q99607 663 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 MAP3K3Q99759 626 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 LMF2Q9BU23 707 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 TEX12Q9BXU0 123 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 RACGAP1Q9H0H5 632 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SOHLH2Q9NX45 425 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 IMPAD1Q9NX62 359 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 NLGN3Q9NZ94 848 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 MAT2BQ9NZL9 334 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CNOT2Q9NZN8 540 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 LRIT1Q9P2V4 623 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 GMEB2Q9UKD1 530 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 A4GNTQ9UNA3 340 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 CFL2Q9Y281 166 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 ZNF443Q9Y2A4 671 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 MRPS2Q9Y399 296 aaKnown RBP6.81□□□□□ -1.32
ATXN3-221ENST00000553498 SLCO1B1Q9Y6L6 691 aa6.81□□□□□ -1.32
ATXN3-221ENST00000553498 IGHV1OR21-1A0A087WYE8 117 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 MYOCOSA0A1B0GUC4 107 aa6.8□□□□□ -1.32
ATXN3-221ENST00000553498 IRGMA1A4Y4 181 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms