RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TBX6O95947 436 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-210ENST00000553455 JCHAINP01591 159 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 KRT8P05787 483 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 FAM200BP0CF97 657 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 TSPY4P0CV99 314 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 TSPY10P0CW01 314 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 HSPA5P11021 654 aaKnown RBP4.01□□□□□ -1.77
SYNE2-210ENST00000553455 UQCRBP14927 111 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 GATA2P23769 480 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-210ENST00000553455 DLSTP36957 453 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 BRCC3P46736 316 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 OR1D4P47884 311 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 ACADVLP49748 655 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 NAPAP54920 295 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 TAF7Q15545 349 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-210ENST00000553455 CNPY1Q3B7I2 92 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 TMEM52BQ4KMG9 183 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 SLC25A24Q6NUK1 477 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 HIPK1Q86Z02 1210 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 RAB7BQ96AH8 199 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 DHTKD1Q96HY7 919 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-210ENST00000553455 C4orf36Q96KX1 117 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 C9orf85Q96MD7 179 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 MCCC1Q96RQ3 725 aaPredicted RBP4.01□□□□□ -1.77
SYNE2-210ENST00000553455 SLC25A51Q9H1U9 297 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 FAM120CQ9NX05 1096 aaKnown RBP4.01□□□□□ -1.77
SYNE2-210ENST00000553455 TMOD2Q9NZR1 351 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 CHMP2BQ9UQN3 213 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 RNF6Q9Y252 685 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 NTNG1Q9Y2I2 539 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 KIF3AQ9Y496 699 aa4.01□□□□□ -1.77
SYNE2-210ENST00000553455 ESYT2A0FGR8 921 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 ZSCAN5CA6NGD5 496 aaPredicted RBP4□□□□□ -1.77
SYNE2-210ENST00000553455 ANGPT2O15123 496 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 MAPK13O15264 365 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 PPIHO43447 177 aaKnown RBP4□□□□□ -1.77
SYNE2-210ENST00000553455 ZNF354AO60765 605 aaPredicted RBP4□□□□□ -1.77
SYNE2-210ENST00000553455 RAMP1O60894 148 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 HPP00738 406 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 ANXA3P12429 323 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 KRT13P13646 458 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 ACADSP16219 412 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 XRCC1P18887 633 aaPredicted RBP4□□□□□ -1.77
SYNE2-210ENST00000553455 HTR2AP28223 471 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 HMGCS2P54868 508 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 CRMP1Q14194 572 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 PPP1R3AQ16821 1122 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 MICAQ29983 383 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 PARGQ86W56 976 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 ZNF540Q8NDQ6 660 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 OR10T2Q8NGX3 314 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 NANPQ8TBE9 248 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 FAM222BQ8WU58 562 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 ELMO2Q96JJ3 720 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 TMEM121Q9BTD3 319 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 COG4Q9H9E3 785 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 UTP6Q9NYH9 597 aaKnown RBP4□□□□□ -1.77
SYNE2-210ENST00000553455 PRODH2Q9UF12 536 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 CHRNA9Q9UGM1 479 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 BARX2Q9UMQ3 279 aaPredicted RBP4□□□□□ -1.77
SYNE2-210ENST00000553455 DUSP12Q9UNI6 340 aa4□□□□□ -1.77
SYNE2-210ENST00000553455 EIF3LQ9Y262 564 aaKnown RBP4□□□□□ -1.77
SYNE2-210ENST00000553455 SF3B1O75533 1304 aaKnown RBP eCLIP3.99□□□□□ -1.77
SYNE2-210ENST00000553455 E9PAM4 449 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 CASKO14936 926 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 EFNA2O43921 213 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 JAK2O60674 1132 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 PIGRP01833 764 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 ASNSP08243 561 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 IGFBP1P08833 259 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-210ENST00000553455 ALPIP09923 528 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 DRD5P21918 477 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 RPL4P36578 427 aaKnown RBP3.99□□□□□ -1.77
SYNE2-210ENST00000553455 ARHGDIBP52566 201 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 METAP1P53582 386 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 USH1GQ495M9 461 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 LGSNQ5TDP6 509 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 SLX4IPQ5VYV7 408 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 NCR3LG1Q68D85 454 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 STAC2Q6ZMT1 411 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 ZNF600Q6ZNG1 722 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 CENPUQ71F23 418 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 CEACAM19Q7Z692 300 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 MYPOPQ86VE0 399 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-210ENST00000553455 OR2T34Q8NGX1 318 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 COMMD4Q9H0A8 199 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 GALPQ9UBC7 116 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 RALGAPA1Q6GYQ0 2036 aa3.99□□□□□ -1.77
SYNE2-210ENST00000553455 COL5A2P05997 1499 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-210ENST00000553455 GRIN2DO15399 1336 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 A0A087WWV3 80 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 TRIM49BA6NDI0 452 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 ZSCAN5BA6NJL1 495 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 CCT8L1PA6NM43 557 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 CTAGE5O15320 804 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 DUX1O43812 170 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 SRPX2O60687 465 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-210ENST00000553455 PCCBP05166 539 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 CT45A10P0DMU9 189 aa3.98□□□□□ -1.77
SYNE2-210ENST00000553455 EPB41P11171 864 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms