RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LCTLQ6UWM7 567 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SBSNQ6UWP8 590 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 ANGPTL8Q6UXH0 198 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RBMS3Q6XE24 437 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 NUP54Q7Z3B4 507 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 CLNKQ7Z7G1 428 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 CCDC25Q86WR0 208 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 VSTM4Q8IW00 320 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 REXO1L1PQ8IX06 675 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 RCOR2Q8IZ40 523 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 MUC15Q8N387 334 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 OR6K3Q8NGY3 331 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 LKAAEAR1Q8TD35 194 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 NEUROG1Q92886 237 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF566Q969W8 418 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 MUCL1Q96DR8 90 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 CLPTM1LQ96KA5 538 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 HIST1H2AHQ96KK5 128 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SFXN2Q96NB2 322 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 FOXN4Q96NZ1 517 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 QKIQ96PU8 341 aaKnown RBP eCLIP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 HIST1H2AJQ99878 128 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 H2AFJQ9BTM1 129 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SSBP4Q9BWG4 385 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 PRRG4Q9BZD6 226 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 STMN4Q9H169 189 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 P2RY12Q9H244 342 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 METTL7AQ9H8H3 244 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 NTN4Q9HB63 628 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 OBP2BQ9NPH6 170 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SNX15Q9NRS6 342 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 GLRX2Q9NS18 164 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 ZNHIT6Q9NWK9 470 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 PIH1D1Q9NWS0 290 aaKnown RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 TEX10Q9NXF1 929 aaPredicted RBP4.6□□□□□ -1.67
CKAP4-203ENST00000553039 TAS2R10Q9NYW0 307 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SH2B3Q9UQQ2 575 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 FKBP7Q9Y680 259 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 SPACA6W5XKT8 324 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 EML6Q6ZMW3 1958 aa4.6□□□□□ -1.67
CKAP4-203ENST00000553039 C2orf92A0A1B0GVN3 265 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 PABPN1LA6NDY0 278 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 DPRXA6NFQ7 191 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CCT8L1PA6NM43 557 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 OR6C76A6NM76 312 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 B4DSR2 109 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 LCE2BO14633 110 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ETHE1O95571 254 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ITGA5P08648 1049 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 RHOXF2BP0C7M4 288 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 MPC1LP0DKB6 136 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 KITP10721 976 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CDH1P12830 882 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ENO3P13929 434 aaPredicted RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 PECAM1P16284 738 aaPredicted RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 NAGAP17050 411 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 TPSB2P20231 275 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 IL32P24001 234 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 IMPA1P29218 277 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 GCH1P30793 250 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 SRD5A2P31213 254 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CDKN2BP42772 138 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CLDN18P56856 261 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 C21orf58P58505 322 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 IL13RA1P78552 427 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 BSPH1Q075Z2 132 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 TGM3Q08188 693 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CDH17Q12864 832 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ANK3Q12955 4377 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 NAE1Q13564 534 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 DOC2AQ14183 400 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 SEMA3AQ14563 771 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 RBBP5Q15291 538 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 TPSAB1Q15661 275 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CARTPTQ16568 116 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 SGCBQ16585 318 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CTU2Q2VPK5 515 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ACSBG2Q5FVE4 666 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 TSTD2Q5T7W7 516 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 DEPDC1Q5TB30 811 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 FNDC7Q5VTL7 733 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 MRNIPQ6NTE8 343 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF544Q6NX49 715 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 GALNT18Q6P9A2 607 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 TRIM40Q6P9F5 258 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 MFSD7Q6UXD7 560 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CCDC50Q8IVM0 306 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CDKL3Q8IVW4 592 aaPredicted RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ZNF321PQ8N8H1 164 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 ATG16L2Q8NAA4 619 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 TTLQ8NG68 377 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 OR13J1Q8NGT2 312 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CTNNBL1Q8WYA6 563 aaPredicted RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 GFM2Q969S9 779 aaKnown RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 SNF8Q96H20 258 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 DOCK7Q96N67 2140 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 NAP1L5Q96NT1 182 aaPredicted RBP4.59□□□□□ -1.67
CKAP4-203ENST00000553039 DGAT2Q96PD7 388 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 CCT8L2Q96SF2 557 aa4.59□□□□□ -1.67
CKAP4-203ENST00000553039 AIF1LQ9BQI0 150 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms