RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PNLIPRP2P54317 469 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 TLE4Q04727 773 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 HSPB3Q12988 150 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 TNFAIP8L3Q5GJ75 292 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 NSUN5P2Q63ZY6 315 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 APOOLQ6UXV4 268 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 ZAR1Q86SH2 424 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 PLCZ1Q86YW0 608 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 MBD3L2Q8NHZ7 208 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 AGR3Q8TD06 166 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 ABTB1Q969K4 478 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 TUBA1CQ9BQE3 449 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 REEP4Q9H6H4 257 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 RUBCNLQ9H714 662 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 ZNF395Q9H8N7 513 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 SIRT3Q9NTG7 399 aaPredicted RBP11.83□□□□□ -0.52
NPAS3-209ENST00000551008 ZDHHC2Q9UIJ5 367 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 CAMK2AQ9UQM7 478 aa11.83□□□□□ -0.52
NPAS3-209ENST00000551008 HEATR5AQ86XA9 2040 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 CD8B2A6NJW9 211 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 ITM2AO43736 263 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 SCO2O43819 266 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 CBR3O75828 277 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 ACTL6AO96019 429 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 BPGMP07738 259 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 ACP2P11117 423 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 CPN1P15169 458 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 SRD5A2P31213 254 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 TIMP3P35625 211 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 STARP49675 285 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 LHX2P50458 406 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 IFFO1Q0D2I5 559 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 SNTB1Q13884 538 aaKnown RBP11.82□□□□□ -0.52
NPAS3-209ENST00000551008 EFR3AQ14156 821 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 MPP2Q14168 576 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 TOMM20Q15388 145 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 SLC25A35Q3KQZ1 300 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 GALNTL6Q49A17 601 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 CYP27C1Q4G0S4 372 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 SH2D4BQ5SQS7 431 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 LACC1Q8IV20 430 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 TRIM42Q8IWZ5 723 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 CLYBLQ8N0X4 340 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 OR2M3Q8NG83 312 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 TMCO6Q96DC7 493 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 PKNOX2Q96KN3 472 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 KLHDC3Q9BQ90 382 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 C20orf27Q9GZN8 174 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 MCCC2Q9HCC0 563 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 DDX18Q9NVP1 670 aaKnown RBP11.82□□□□□ -0.52
NPAS3-209ENST00000551008 SENP1Q9P0U3 644 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 RAB21Q9UL25 225 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 CBLCQ9ULV8 474 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 MED13LQ71F56 2210 aa11.82□□□□□ -0.52
NPAS3-209ENST00000551008 LYPLA1O75608 230 aaPredicted RBP11.81□□□□□ -0.52
NPAS3-209ENST00000551008 NKX2-2O95096 273 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 IL33O95760 270 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 DHRS4L1P0CG22 281 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 TCEA1P23193 301 aaKnown RBP11.81□□□□□ -0.52
NPAS3-209ENST00000551008 IL12BP29460 328 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 CLDN15P56746 228 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 CLDN18P56856 261 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 FOXF2Q12947 444 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 FBXL19-AS1Q494R0 122 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 EXOC3L1Q86VI1 746 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 DDIASQ8IXT1 998 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 PM20D2Q8IYS1 436 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 OR7A2PQ8NGA2 310 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 PIK3R3Q92569 461 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 ZBTB9Q96C00 473 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 PPCDCQ96CD2 204 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 IQCGQ9H095 443 aaKnown RBP11.81□□□□□ -0.52
NPAS3-209ENST00000551008 EQTNQ9NQ60 294 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 FBXO34Q9NWN3 711 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 TAS2R10Q9NYW0 307 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 CLCF1Q9UBD9 225 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 ATP6V1HQ9UI12 483 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 MRPS18CQ9Y3D5 142 aaKnown RBP11.81□□□□□ -0.52
NPAS3-209ENST00000551008 OR10H1Q9Y4A9 318 aa11.81□□□□□ -0.52
NPAS3-209ENST00000551008 HSPB2A8KAH6 182 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 SCAMP2O15127 329 aaKnown RBP11.8□□□□□ -0.52
NPAS3-209ENST00000551008 PEX11AO75192 247 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 SKAP2O75563 359 aaPredicted RBP11.8□□□□□ -0.52
NPAS3-209ENST00000551008 LAMP1P11279 417 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 ZNF708P17019 499 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 POU3F2P20265 443 aaPredicted RBP11.8□□□□□ -0.52
NPAS3-209ENST00000551008 GABRA3P34903 492 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 SERPINB4P48594 390 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 PSPHP78330 225 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
NPAS3-209ENST00000551008 PTGR1Q14914 329 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 HSPB2Q16082 182 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 DUSP5Q16690 384 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 GRAMD1BQ3KR37 738 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 KRT71Q3SY84 523 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 C6orf136Q5SQH8 315 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 GALNT10Q86SR1 603 aa11.8□□□□□ -0.52
NPAS3-209ENST00000551008 IFNEQ86WN2 208 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms