RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 RAB11AP62491 216 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 GSTO1P78417 241 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 CX3CL1P78423 397 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 XIAPP98170 497 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 SULT2A1Q06520 285 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 IL10RBQ08334 325 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 ILF2Q12905 390 aaKnown RBP3.8□□□□□ -1.8
RAP1B-226ENST00000541968 NME3Q13232 169 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 SLAQ13239 276 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 CYLC2Q14093 348 aaPredicted RBP3.8□□□□□ -1.8
RAP1B-226ENST00000541968 GNA13Q14344 377 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 NPTX1Q15818 432 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 RAB11BQ15907 218 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 STX1AQ16623 288 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 DCAF4L1Q3SXM0 396 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 TEX44Q53QW1 395 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 CMPK2Q5EBM0 449 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 TTC27Q6P3X3 843 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 SLC39A4Q6P5W5 647 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 TTC23LQ6PF05 361 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 LINGO4Q6UY18 593 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 TPGS1Q6ZTW0 290 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 IL17RELQ6ZVW7 336 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 KIAA1328Q86T90 577 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 CBWD2Q8IUF1 395 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 VSTM4Q8IW00 320 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 CCDC36Q8IYA8 594 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 APCDD1Q8J025 514 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 LSMEM2Q8N112 164 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 FNDC5Q8NAU1 212 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 OR4K14Q8NGD5 310 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 OR6S1Q8NH40 331 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 NDNFQ8TB73 568 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 LRRC20Q8TCA0 184 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 PROX1Q92786 737 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 LURAP1Q96LR2 239 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 GUCD1Q96NT3 240 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 ACCSQ96QU6 501 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 C19orf43Q9BQ61 176 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 C16orf70Q9BSU1 422 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 WRAP53Q9BUR4 548 aaKnown RBP3.8□□□□□ -1.8
RAP1B-226ENST00000541968 ANKRD60Q9BZ19 345 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 ROPN1BQ9BZX4 212 aaPredicted RBP3.8□□□□□ -1.8
RAP1B-226ENST00000541968 SLC39A8Q9C0K1 460 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 WWP1Q9H0M0 922 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 HDHD2Q9H0R4 259 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 DPAGT1Q9H3H5 408 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 DPEP3Q9H4B8 488 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 SMYD3Q9H7B4 428 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 UCK1Q9HA47 277 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 DDX28Q9NUL7 540 aaKnown RBP3.8□□□□□ -1.8
RAP1B-226ENST00000541968 MBD2Q9UBB5 411 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 CTSFQ9UBX1 484 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 TBC1D24Q9ULP9 559 aa3.8□□□□□ -1.8
RAP1B-226ENST00000541968 RUVBL2Q9Y230 463 aaKnown RBP3.8□□□□□ -1.8
RAP1B-226ENST00000541968 COL5A2P05997 1499 aaPredicted RBP3.79□□□□□ -1.8
RAP1B-226ENST00000541968 TRAV24A0A0B4J272 114 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 A0A1W2PPV4 95 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 CCDC162PA2VCL2 907 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 TMEM150CB9EJG8 249 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 GAPDHSO14556 408 aaPredicted RBP3.79□□□□□ -1.8
RAP1B-226ENST00000541968 KHDRBS3O75525 346 aaKnown RBP3.79□□□□□ -1.8
RAP1B-226ENST00000541968 UPK3AO75631 287 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 CABYRO75952 493 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 CLDN1O95832 211 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 GSRP00390 522 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 CALCAP01258 141 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 GPIP06744 558 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 CRYGBP07316 175 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 CHRNGP07510 517 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 APRTP07741 180 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 NUDT17P0C025 328 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 TRIM49P0CI25 452 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 TRIM49CP0CI26 452 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 ZNF24P17028 368 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 FCARP24071 287 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 PSMA2P25787 234 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 HOXA6P31267 233 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 ETV5P41161 510 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 RPS5P46782 204 aaKnown RBP3.79□□□□□ -1.8
RAP1B-226ENST00000541968 KCNK10P57789 538 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 NLRP11P59045 1033 aaKnown RBP3.79□□□□□ -1.8
RAP1B-226ENST00000541968 SEC61GP60059 68 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 BASP1P80723 227 aaKnown RBP3.79□□□□□ -1.8
RAP1B-226ENST00000541968 AGKQ53H12 422 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 BSPRYQ5W0U4 402 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 SNRNP48Q6IEG0 339 aaKnown RBP3.79□□□□□ -1.8
RAP1B-226ENST00000541968 FAM166AQ6J272 317 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 SLC25A25Q6KCM7 469 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 CENPUQ71F23 418 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 SSX9Q7RTT3 188 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 VPS36Q86VN1 386 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 TGIF2LXQ8IUE1 241 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 SYT14Q8NB59 555 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 COLGALT1Q8NBJ5 622 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 PPFIBP2Q8ND30 876 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 ZNF596Q8TC21 504 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 M1APQ8TC57 530 aa3.79□□□□□ -1.8
RAP1B-226ENST00000541968 SPRYD4Q8WW59 207 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms