RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MFFQ9GZY8 342 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF768Q9H5H4 540 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CLMPQ9H6B4 373 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 UFSP2Q9NUQ7 469 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ASB6Q9NWX5 421 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 HS3ST4Q9Y661 456 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 TVP23AA6NH52 213 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 HMSDA8MTL9 139 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 IRAK2O43187 625 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PPP3CBP16298 524 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CBLP22681 906 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 GUCA1AP43080 201 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 MAPK8P45983 427 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 STK19P49842 368 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PNLIPRP1P54315 467 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ARF3P61204 181 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ARF1P84077 181 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 LRRC32Q14392 662 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 SOWAHCQ53LP3 525 aaPredicted RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ALG1LQ6GMV1 187 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 BEND4Q6ZU67 534 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ATCAYQ86WG3 371 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ADGRG2Q8IZP9 1017 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CLDN19Q8N6F1 224 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 OR7G2Q8NG99 324 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 FBXW5Q969U6 566 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 UROC1Q96N76 676 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 OR5M11Q96RB7 305 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 ZDHHC5Q9C0B5 715 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 CFAP97Q9P2B7 532 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 POMT2Q9UKY4 750 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 NDRG2Q9UN36 371 aaKnown RBP5.12□□□□□ -1.59
PTPRD-213ENST00000537002 PCDHGA6Q9Y5G7 932 aa5.12□□□□□ -1.59
PTPRD-213ENST00000537002 MTX2O75431 263 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PCDH8O95206 1070 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GPX2P18283 190 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CCL23P55773 120 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 FXYD6P3P58550 94 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ERVPABLB-1P60509 514 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RPS26P62854 115 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TAF10Q12962 218 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PDSS1Q5T2R2 415 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 LYPD4Q6UWN0 246 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CYHR1Q6ZMK1 362 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF454Q8N9F8 522 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 OR4M2Q8NGB6 313 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TMEM41AQ96HV5 264 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PKMYT1Q99640 499 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TGIF2Q9GZN2 237 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 HAPLN2Q9GZV7 340 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NLE1Q9NVX2 485 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NPTNQ9Y639 398 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 MFSD2BA6NFX1 497 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 WISP3O95389 354 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SIX6O95475 246 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 EDNRBP24530 442 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GPR1P46091 355 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SOX2P48431 317 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PSEN2P49810 448 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RNF144AP50876 292 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RPS25P62851 125 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TAP2Q03519 686 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ILF3Q12906 894 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PTCHD3Q3KNS1 767 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 IGSF11Q5DX21 431 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 XKR4Q5GH76 650 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ANKRD34AQ69YU3 496 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 LYPD8Q6UX82 237 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GLCCI1Q86VQ1 547 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SYT14Q8NB59 555 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PXYLP1Q8TE99 480 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ATOH1Q92858 354 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GAS2L1Q99501 681 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 OPA3Q9H6K4 179 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 P2RX2Q9UBL9 471 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 PCDHB11Q9Y5F2 797 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NPFFR2Q9Y5X5 522 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 CLDN11O75508 207 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GATBO75879 557 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 UBBP0CG47 229 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 UBCP0CG48 685 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 EVX1P49640 407 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TAS2R43P59537 309 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 RPS27AP62979 156 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 UBA52P62987 128 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SHC2P98077 582 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SLBPQ14493 270 aaKnown RBP eCLIP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 HYAL4Q2M3T9 481 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF674Q2M3X9 581 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF628Q5EBL2 1059 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 AVPI1Q5T686 147 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 LAMTOR1Q6IAA8 161 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 NOXRED1Q6NXP6 359 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 SEZ6L2Q6UXD5 910 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 LRRC69Q6ZNQ3 347 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 TRIM46Q7Z4K8 759 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 THOC6Q86W42 341 aaKnown RBP5.11□□□□□ -1.59
PTPRD-213ENST00000537002 OR6V1Q8N148 313 aa5.11□□□□□ -1.59
PTPRD-213ENST00000537002 GNPDA2Q8TDQ7 276 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms