RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PRAMEF25A6NGN4 478 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 IDSB3KWA1 339 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 RECKO95980 971 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 FESP07332 822 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 SSTR4P31391 388 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 GALNSP34059 522 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 KCNJ5P48544 419 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 RHAGQ02094 409 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 FAM69BQ5VUD6 431 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 TSEN54Q7Z6J9 526 aaKnown RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 SVOPLQ8N434 492 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 OR2Y1Q8NGV0 311 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 OR5K1Q8NHB7 308 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 MAGEE2Q8TD90 523 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 PROX1Q92786 737 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 TSLPQ969D9 159 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 STACQ99469 402 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 RSPO3Q9BXY4 272 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 DUSP22Q9NRW4 184 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 KCND3Q9UK17 655 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 TCFL5Q9UL49 500 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 RAB26Q9ULW5 256 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 ERVK-19Q9WJR5 959 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 PTRH2Q9Y3E5 179 aaKnown RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 PCDHGA6Q9Y5G7 932 aa13.37□□□□□ -0.27
TTC39A-216ENST00000530004 MAGED1Q9Y5V3 778 aaPredicted RBP13.37□□□□□ -0.27
TTC39A-216ENST00000530004 DSPPQ9NZW4 1301 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 IGKV3D-11A0A0A0MRZ8 115 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 TLX3O43711 291 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-216ENST00000530004 IFNW1P05000 195 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 ITGA2P17301 1181 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 DCTP40126 519 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 MAP3K8P41279 467 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 KCNC4Q03721 635 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 CLN3Q13286 438 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 ARHGAP11BQ3KRB8 267 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 C6orf52Q5T4I8 152 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 TMEM179BQ7Z7N9 219 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 HS3ST5Q8IZT8 346 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 COX18Q8N8Q8 333 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 PLPP5Q8NEB5 264 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 GPR151Q8TDV0 419 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 PIK3R3Q92569 461 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF354BQ96LW1 612 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF300Q96RE9 604 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-216ENST00000530004 CRB3Q9BUF7 120 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 AMBRA1Q9C0C7 1298 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 QRSL1Q9H0R6 528 aaKnown RBP13.36□□□□□ -0.27
TTC39A-216ENST00000530004 FOLH1BQ9HBA9 442 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 PNO1Q9NRX1 252 aaKnown RBP13.36□□□□□ -0.27
TTC39A-216ENST00000530004 C3orf18Q9UK00 162 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 SAMHD1Q9Y3Z3 626 aaKnown RBP13.36□□□□□ -0.27
TTC39A-216ENST00000530004 HEMK1Q9Y5R4 338 aaPredicted RBP13.36□□□□□ -0.27
TTC39A-216ENST00000530004 AP4B1Q9Y6B7 739 aa13.36□□□□□ -0.27
TTC39A-216ENST00000530004 C17orf105B2RV13 164 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 DPM1O60762 260 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 PRAMEF2O60811 474 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ZIC2O95409 532 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ALPPP05187 535 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 HEXBP07686 556 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 UMODP07911 640 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 CYC1P08574 325 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 GABRA3P34903 492 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 FOLR3P41439 243 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 YAP1P46937 504 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 EMDP50402 254 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 EMP2P54851 167 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 RPS18P62269 152 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 DAG1Q14118 895 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 CCNJQ5T5M9 372 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 FRRS1Q6ZNA5 592 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 HIPK1Q86Z02 1210 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF248Q8NDW4 579 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 CHDHQ8NE62 594 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 SNIP1Q8TAD8 396 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 APOBEC4Q8WW27 367 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 HOXB13Q92826 284 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 KIAA1143Q96AT1 154 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ZNF347Q96SE7 839 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 SDF2Q99470 211 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 OSBPL11Q9BXB4 747 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 Q9H521 79 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 CCDC86Q9H6F5 360 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 REEP1Q9H902 201 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 GPN2Q9H9Y4 310 aaPredicted RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 MKLN1Q9UL63 735 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 WDR45Q9Y484 360 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 PCDHGB3Q9Y5G1 929 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 CACNA1AO00555 2505 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 TCRBV16S1A1N1A0A5B0 115 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 A8MUA0 341 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 J3KTA2 159 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 DLGAP1O14490 977 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 FCMRO60667 390 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 NKX2-2O95096 273 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 RRM2P31350 389 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 DNAJA1P31689 397 aaKnown RBP13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ALDH3A2P51648 485 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 FUT7Q11130 342 aa13.35□□□□□ -0.27
TTC39A-216ENST00000530004 ZNHIT3Q15649 155 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms