RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 NINJ2Q9NZG7 142 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 DPM3Q9P2X0 92 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 P2RX2Q9UBL9 471 aa3.78□□□□□ -1.8
SKP1-208ENST00000521216 ABCC4O15439 1325 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 UBE4BO95155 1302 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 H3BTX0 84 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 ALOX15BO15296 676 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 PPIHO43447 177 aaKnown RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 IGFBP5P24593 272 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 CALRP27797 417 aaKnown RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 NDPQ00604 133 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 CAMK4Q16566 473 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 TTC31Q49AM3 519 aaPredicted RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 IRGCQ6NXR0 463 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 LEG1Q6P5S2 330 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 SLC39A4Q6P5W5 647 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 BTNL3Q6UXE8 466 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 ISLR2Q6UXK2 745 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 VPS36Q86VN1 386 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 DQX1Q8TE96 717 aaKnown RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 WRAP53Q9BUR4 548 aaKnown RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 TSSK1BQ9BXA7 367 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 YTHDF1Q9BYJ9 559 aaKnown RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 OPN3Q9H1Y3 402 aaPredicted RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 MEPEQ9NQ76 525 aaPredicted RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 TRPV5Q9NQA5 729 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 SOHLH2Q9NX45 425 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 PLEKHA6Q9Y2H5 1048 aa3.77□□□□□ -1.81
SKP1-208ENST00000521216 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.77□□□□□ -1.81
SKP1-208ENST00000521216 CFAP65Q6ZU64 1925 aaKnown RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 SLC17A2O00624 439 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 RASGRF2O14827 1237 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 NDUFA7O95182 113 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 ANXA4P09525 319 aaPredicted RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 H2AFZP0C0S5 128 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 DNAH10OSP0CZ25 163 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 RRASP10301 218 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 ERVPABLB-1P60509 514 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 FUT7Q11130 342 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 ZNF658Q5TYW1 1059 aaPredicted RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 RSBN1Q5VWQ0 802 aaPredicted RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 RAET1GQ6H3X3 334 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 LPCAT2Q7L5N7 544 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 FBXO16Q8IX29 292 aaPredicted RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 HDDC3Q8N4P3 179 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 FAM71CQ8NEG0 241 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 OR8H1Q8NGG4 311 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 VSIG2Q96IQ7 327 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 TM2D1Q9BX74 207 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 KRT23Q9C075 422 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 RPAP3Q9H6T3 665 aaPredicted RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 YY1AP1Q9H869 796 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 HOOK1Q9UJC3 728 aaKnown RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 EXOSC1Q9Y3B2 195 aaKnown RBP3.76□□□□□ -1.81
SKP1-208ENST00000521216 USP6P35125 1406 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 GPRASP1Q5JY77 1395 aa3.76□□□□□ -1.81
SKP1-208ENST00000521216 FBLL1A6NHQ2 334 aaKnown RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 E9PMD0 336 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 SGK494L7N484 410 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 CCDC166P0CW27 439 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 RPA1P27694 616 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 RPS8P62241 208 aaKnown RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 PLOD1Q02809 727 aaPredicted RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 OVGP1Q12889 678 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 SPP2Q13103 211 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 RFTN1Q14699 578 aaPredicted RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 KIAA0040Q15053 153 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 CEBPEQ15744 281 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 GLYR1Q49A26 553 aaPredicted RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 HSP90AB3PQ58FF7 597 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 CNSTQ6PJW8 725 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 RBM43Q6ZSC3 357 aaKnown RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 ZNF619Q8N2I2 560 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 CADM2Q8N3J6 435 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 MRPL43Q8N983 215 aaKnown RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 MCHR2Q969V1 340 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 SLC25A36Q96CQ1 311 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 NFKBIZQ9BYH8 718 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 VNN3Q9NY84 501 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 ODF2LQ9ULJ1 636 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 MOKQ9UQ07 419 aa3.75□□□□□ -1.81
SKP1-208ENST00000521216 PIN4Q9Y237 131 aaKnown RBP3.75□□□□□ -1.81
SKP1-208ENST00000521216 A8MU10 97 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 NUDT21O43809 227 aaKnown RBP3.74□□□□□ -1.81
SKP1-208ENST00000521216 PTBP3O95758 552 aaKnown RBP3.74□□□□□ -1.81
SKP1-208ENST00000521216 JCHAINP01591 159 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 CA3P07451 260 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 MAPK3P27361 379 aaPredicted RBP3.74□□□□□ -1.81
SKP1-208ENST00000521216 NF2P35240 595 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 TNNT2P45379 298 aaPredicted RBP3.74□□□□□ -1.81
SKP1-208ENST00000521216 EMDP50402 254 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 P2RY4P51582 365 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 GMFBP60983 142 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 EXOSC2Q13868 293 aaKnown RBP3.74□□□□□ -1.81
SKP1-208ENST00000521216 TFDP1Q14186 410 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 CYP51A1Q16850 503 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 PAGE2BQ5JRK9 111 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 TOR1AIP1Q5JTV8 583 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 CROCCQ5TZA2 2017 aa3.74□□□□□ -1.81
SKP1-208ENST00000521216 ZNF57Q68EA5 555 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms