RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ASB4Q9Y574 426 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SNX11Q9Y5W9 270 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 ABCD4O14678 606 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 NUDT7P0C024 238 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 EEF1B2P24534 225 aaKnown RBP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 SPINT3P49223 89 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 NXPH1P58417 271 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 HNRNPKP61978 463 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLIP1-205ENST00000514271 GNA13Q14344 377 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 ENTPD8Q5MY95 495 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 GPSM1Q86YR5 675 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 LINGO1Q96FE5 620 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 WDR92Q96MX6 357 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 GPR63Q9BZJ6 419 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 LRTM1Q9HBL6 345 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 KRT84Q9NSB2 600 aa6.95□□□□□ -1.3
CLIP1-205ENST00000514271 PLD2O14939 933 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 SCAMP2O15127 329 aaKnown RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 CASC3O15234 703 aaKnown RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 FLRT2O43155 660 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 SUV39H1O43463 412 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 TGFB1P01137 390 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 RAF1P04049 648 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 BCKDHBP21953 392 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ACSL1P33121 698 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 DUSP3P51452 185 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 MAXP61244 160 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 DMWDQ09019 674 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 AANATQ16613 207 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 TATDN3Q17R31 274 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF385BQ569K4 471 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 KRBOX4Q5JUW0 171 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 RGS7BPQ6MZT1 257 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 LRRC70Q7Z2Q7 622 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 FAM98AQ8NCA5 519 aaKnown RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 OR4D11Q8NGI4 311 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 DEDD2Q8WXF8 326 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 CDC6Q99741 560 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 DPYSL5Q9BPU6 564 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 MAPKAP1Q9BPZ7 522 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ORAI3Q9BRQ5 295 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 TMPRSS13Q9BYE2 586 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 NUAK2Q9H093 628 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 FAM83DQ9H4H8 585 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 C6orf106Q9H6K1 298 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 IPPKQ9H8X2 491 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 PLEKHA1Q9HB21 404 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 PIPOXQ9P0Z9 390 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 RPS6KA6Q9UK32 745 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 FBXL3Q9UKT7 428 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 MEIKINA0A087WXM9 373 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 TRDV1A0A1B0GX56 115 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 OR2M5A3KFT3 312 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 PRAMEF27A3QJZ7 478 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 TLR4O00206 839 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 SPINT1O43278 529 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 RGS14O43566 566 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 GSTZ1O43708 216 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 BNIP3LO60238 219 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 MPZL2O60487 215 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ANXA8P13928 327 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ITGALP20701 1170 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ZP3P21754 424 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 MYL9P24844 172 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ACRV1P26436 265 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 PSMB9P28065 219 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 TTPAP49638 278 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ETV1P50549 477 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 GTF2H3Q13889 308 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 NFE2L1Q14494 772 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 IGSF11Q5DX21 431 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 PRSS42Q7Z5A4 293 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 PARGQ86W56 976 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 AHCYL2Q96HN2 611 aaKnown RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 MAGEB10Q96LZ2 347 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 NCOR1P1Q9H4R4 102 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 TMEM9BQ9NQ34 198 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 MS4A12Q9NXJ0 267 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 KIF25Q9UIL4 384 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ZNF490Q9ULM2 529 aaPredicted RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ZFR2Q9UPR6 939 aaKnown RBP6.94□□□□□ -1.3
CLIP1-205ENST00000514271 KCNK7Q9Y2U2 307 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 SNX8Q9Y5X2 465 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 ACTL7AQ9Y615 435 aa6.94□□□□□ -1.3
CLIP1-205ENST00000514271 A0A0G2JPF8 293 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 CENPXA8MT69 81 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SUPT3HB4E1H0 165 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 HNRNPCL3B7ZW38 293 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 KPNA5O15131 536 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 STX7O15400 261 aaKnown RBP6.93□□□□□ -1.3
CLIP1-205ENST00000514271 LANCL1O43813 399 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 ETHE1O95571 254 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 KRT75O95678 551 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 GASTP01350 101 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 FGF2P09038 288 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 HNRNPCL4P0DMR1 293 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SAT1P21673 171 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 FMO4P31512 558 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SOX6P35712 828 aa6.93□□□□□ -1.3
CLIP1-205ENST00000514271 SRSF4Q08170 494 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms