RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 COMMD4Q9H0A8 199 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 ZBP1Q9H171 429 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 AGPAT5Q9NUQ2 364 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 ZNF446Q9NWS9 450 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 PAK5Q9P286 719 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 TMCC3Q9ULS5 477 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 B9D1Q9UPM9 204 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 NTNG1Q9Y2I2 539 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 RNF115Q9Y4L5 304 aa4.5□□□□□ -1.69
LINC01088-209ENST00000512130 A8MUI8 341 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 KRTAP16-1A8MUX0 517 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 PI15O43692 258 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 IGHV3-9P01782 118 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 WNT2P09544 360 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 H2AFZP0C0S5 128 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 ANXA3P12429 323 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 SDC1P18827 310 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 PRPHP41219 470 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 HMGCS2P54868 508 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 SLC8A3P57103 927 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 PPP1R3AQ16821 1122 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 USH1GQ495M9 461 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 SLC36A3Q495N2 470 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 HIGD2BQ4VC39 106 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 ASPHD2Q6ICH7 369 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 GALNT17Q6IS24 598 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 SLC25A24Q6NUK1 477 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 CBLN3Q6UW01 205 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 REG3GQ6UW15 175 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 ARMCX2Q7L311 632 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 GTSCR1Q86UQ5 136 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 HIPK1Q86Z02 1210 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 POM121L12Q8N7R1 296 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 MAPK1IP1LQ8NDC0 245 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 ZNF671Q8TAW3 534 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 FNDC8Q8TC99 324 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 TFB1MQ8WVM0 346 aaKnown RBP4.49□□□□□ -1.69
LINC01088-209ENST00000512130 ADIPOR1Q96A54 375 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 RAB7BQ96AH8 199 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 C11orf24Q96F05 449 aaPredicted RBP4.49□□□□□ -1.69
LINC01088-209ENST00000512130 SDSLQ96GA7 329 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 FEM1AQ9BSK4 669 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 PUS3Q9BZE2 481 aaKnown RBP4.49□□□□□ -1.69
LINC01088-209ENST00000512130 DHX33Q9H6R0 707 aaKnown RBP4.49□□□□□ -1.69
LINC01088-209ENST00000512130 PALMDQ9NP74 551 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 CUTCQ9NTM9 273 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 RBM28Q9NW13 759 aaKnown RBP4.49□□□□□ -1.69
LINC01088-209ENST00000512130 IMPAD1Q9NX62 359 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 SNX6Q9UNH7 406 aa4.49□□□□□ -1.69
LINC01088-209ENST00000512130 SF3B1O75533 1304 aaKnown RBP eCLIP4.48□□□□□ -1.694e-7■■■■□ 23.4
LINC01088-209ENST00000512130 GSAPA4D1B5 854 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 SDHDO14521 159 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 TM9SF1O15321 606 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 RAMP1O60894 148 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 STX11O75558 287 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 MBD3O95983 291 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 PSMA5P28066 241 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 SHC1P29353 583 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 RPS6P62753 249 aaKnown RBP4.48□□□□□ -1.69
LINC01088-209ENST00000512130 SLC10A1Q14973 349 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 TATDN3Q17R31 274 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 NCR3LG1Q68D85 454 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 BLOC1S2Q6QNY1 142 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 GMCL1P1Q8NEA9 526 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 SPATA3Q8NHX4 192 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 DHTKD1Q96HY7 919 aaPredicted RBP4.48□□□□□ -1.69
LINC01088-209ENST00000512130 SLC30A2Q9BRI3 323 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 FAM120CQ9NX05 1096 aaKnown RBP4.48□□□□□ -1.69
LINC01088-209ENST00000512130 ELOVL2Q9NXB9 296 aa4.48□□□□□ -1.69
LINC01088-209ENST00000512130 DDX49Q9Y6V7 483 aaKnown RBP4.48□□□□□ -1.69
LINC01088-209ENST00000512130 PCNX3Q9H6A9 2034 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 A0A1B0GU03 582 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 EFCAB7A8K855 629 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 KBTBD11O94819 623 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 GAS8-AS1O95177 125 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 PIGRP01833 764 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 BCKDHAP12694 445 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 ACADSP16219 412 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 ATP6V1C1P21283 382 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 HMGCLP35914 325 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 ARHGDIBP52566 201 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 NTHL1P78549 312 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 BDH1Q02338 343 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 ZFP36L1Q07352 338 aaKnown RBP4.47□□□□□ -1.69
LINC01088-209ENST00000512130 CAMK4Q16566 473 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 NADK2Q4G0N4 442 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 DCST2Q5T1A1 773 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 LGSNQ5TDP6 509 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 PRSS48Q7RTY5 328 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 PARGQ86W56 976 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 FGFRL1Q8N441 504 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 ZSCAN4Q8NAM6 433 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-209ENST00000512130 OR6T1Q8NGN1 323 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 TRIM44Q96DX7 344 aaPredicted RBP4.47□□□□□ -1.69
LINC01088-209ENST00000512130 ATOH8Q96SQ7 321 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 RPP25Q9BUL9 199 aaKnown RBP4.47□□□□□ -1.69
LINC01088-209ENST00000512130 SLC25A51Q9H1U9 297 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 EXOSC3Q9NQT5 275 aaKnown RBP4.47□□□□□ -1.69
LINC01088-209ENST00000512130 ARMCX1Q9P291 453 aa4.47□□□□□ -1.69
LINC01088-209ENST00000512130 PRODH2Q9UF12 536 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms