RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 GPBP1Q86WP2 473 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 TGIF2LYQ8IUE0 185 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 MKXQ8IYA7 352 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 C18orf25Q96B23 403 aaPredicted RBP2.23□□□□□ -2.05
SMC4-227ENST00000497984 VMP1Q96GC9 406 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 VPS39Q96JC1 886 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 CARD6Q9BX69 1037 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 TSSK1BQ9BXA7 367 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 FTHL17Q9BXU8 183 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 GLT8D2Q9H1C3 349 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 ABCG8Q9H221 673 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 FAM114A2Q9NRY5 505 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 DCAF13Q9NV06 445 aaKnown RBP2.23□□□□□ -2.05
SMC4-227ENST00000497984 COPS7AQ9UBW8 275 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 FZR1Q9UM11 496 aa2.23□□□□□ -2.05
SMC4-227ENST00000497984 RAI1Q7Z5J4 1906 aaPredicted RBP2.23□□□□□ -2.05
SMC4-227ENST00000497984 HIVEP2P31629 2446 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 MACROD2A1Z1Q3 448 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 TMEM110-MUSTN1A8MSY1 372 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 TM9SF1O15321 606 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 SDC3O75056 442 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 LYPLA1O75608 230 aaPredicted RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 CABYRO75952 493 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 SEMG1P04279 462 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 STSP08842 583 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 SLC35G4P0C7Q5 338 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 CCDC166P0CW27 439 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 EMDP50402 254 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 RPS6P62753 249 aaKnown RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 UBXN1Q04323 297 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 TLE4Q04727 773 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 ORC2Q13416 577 aaPredicted RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 RAB35Q15286 201 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 ZKSCAN8Q15776 578 aaPredicted RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 PARP6Q2NL67 630 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 C2orf76Q3KRA6 126 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 CMPK2Q5EBM0 449 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 EOGTQ5NDL2 527 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 OR5M10Q6IEU7 315 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 OLFM4Q6UX06 510 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 HACD2Q6Y1H2 254 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 TOM1L2Q6ZVM7 507 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 PAQR9Q6ZVX9 377 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 CCDC91Q7Z6B0 441 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 TMEM179BQ7Z7N9 219 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 TMEM110Q86TL2 294 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 VPS36Q86VN1 386 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 AMZ2Q86W34 360 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 ERI1Q8IV48 349 aaKnown RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 CSNK1A1LQ8N752 337 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 LEMD2Q8NC56 503 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 BBS1Q8NFJ9 593 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 ST7LQ8TDW4 575 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 ATP6V1E2Q96A05 226 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 DTD2Q96FN9 168 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 TEX13AQ9BXU3 409 aaPredicted RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 MEPEQ9NQ76 525 aaPredicted RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 CYTL1Q9NRR1 136 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 FAM153AQ9UHL3 310 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 ZNF490Q9ULM2 529 aaPredicted RBP2.22□□□□□ -2.05
SMC4-227ENST00000497984 FKBP7Q9Y680 259 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 CHD4Q14839 1912 aa2.22□□□□□ -2.05
SMC4-227ENST00000497984 A0A0U1RQG5 324 aaPredicted RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 CCDC69A6NI79 296 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 HTATSF1O43719 755 aaKnown RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 HSF2BPO75031 334 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 IGFBP1P08833 259 aaPredicted RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 RPS2P15880 293 aaKnown RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 RFC2P35250 354 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 OR3A4PP47883 348 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 HNRNPFP52597 415 aaKnown RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 RAG2P55895 527 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 HERVK_113P63132 956 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 ERVK-8P63133 956 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 GALK2Q01415 458 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 OTUD4Q01804 1114 aaKnown RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 ZP4Q12836 540 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 LRIT3Q3SXY7 679 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 ZNF57Q68EA5 555 aaPredicted RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 NET1Q7Z628 596 aaPredicted RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 PPP1R27Q86WC6 154 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 CCDC36Q8IYA8 594 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 LRRC17Q8N6Y2 441 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 ADAMTS16Q8TE57 1224 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 MCHR2Q969V1 340 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 TMEM80Q96HE8 168 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 SLC35E1Q96K37 410 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 SMIM14Q96QK8 99 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 ERVK-6Q9BXR3 956 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 CARD9Q9H257 536 aa2.21□□□□□ -2.06
SMC4-227ENST00000497984 DUS2Q9NX74 493 aaKnown RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 EXOSC1Q9Y3B2 195 aaKnown RBP2.21□□□□□ -2.06
SMC4-227ENST00000497984 RAD54L2Q9Y4B4 1467 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 HMCN1Q96RW7 5635 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 PDXKO00764 312 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 PNPP00491 289 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 CD55P08174 381 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 ABHD2P08910 425 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 GNSP15586 552 aa2.2□□□□□ -2.06
SMC4-227ENST00000497984 ZNF45Q02386 682 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms