RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 BTNL3Q6UXE8 466 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 HACD2Q6Y1H2 254 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 LHFPL4Q7Z7J7 247 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 SLC22A18ASQ8N1D0 253 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 OR5AU1Q8NGC0 362 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 RFESDQ8TAC1 157 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 ITLN1Q8WWA0 313 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 THRSPQ92748 146 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 ADIPOR1Q96A54 375 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 UPRTQ96BW1 309 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 RAB3CQ96E17 227 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 TBC1D10AQ9BXI6 508 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 NFKBIZQ9BYH8 718 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 PUS3Q9BZE2 481 aaKnown RBP3.18□□□□□ -1.9
SMC4-225ENST00000497203 LAMP5Q9UJQ1 280 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 NTNG1Q9Y2I2 539 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 RNF115Q9Y4L5 304 aa3.18□□□□□ -1.9
SMC4-225ENST00000497203 CLDN5O00501 218 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 CASKO14936 926 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 TM9SF1O15321 606 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 JAK2O60674 1132 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 KBTBD11O94819 623 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 CSF2P04141 144 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 IGFBP1P08833 259 aaPredicted RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 TSPY4P0CV99 314 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 TSPY10P0CW01 314 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 HSPA5P11021 654 aaKnown RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 IGFBP5P24593 272 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 ZNF33BQ06732 778 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 TFDP1Q14186 410 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 UBE2V2Q15819 145 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 DCST2Q5T1A1 773 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 SCYL2Q6P3W7 929 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 CBLN3Q6UW01 205 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 LRRC70Q7Z2Q7 622 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 ERASQ7Z444 233 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 SUMF1Q8NBK3 374 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 TFB1MQ8WVM0 346 aaKnown RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 DNAJA3Q96EY1 480 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 C11orf24Q96F05 449 aaPredicted RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 ZBED6CLQ96FA7 236 aaPredicted RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 GSDMCQ9BYG8 508 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 COMMD4Q9H0A8 199 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 TIGARQ9NQ88 270 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 AGPAT5Q9NUQ2 364 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 FAM120CQ9NX05 1096 aaKnown RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 IMPAD1Q9NX62 359 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 TMOD2Q9NZR1 351 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 ZNF581Q9P0T4 197 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 RCOR3Q9P2K3 495 aaPredicted RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 BARX2Q9UMQ3 279 aaPredicted RBP3.17□□□□□ -1.9
SMC4-225ENST00000497203 B9D1Q9UPM9 204 aa3.17□□□□□ -1.9
SMC4-225ENST00000497203 GSAPA4D1B5 854 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 PPIHO43447 177 aaKnown RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 LCMT2O60294 686 aaKnown RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 CHRNA1P02708 482 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 PCCBP05166 539 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 ASNSP08243 561 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 WNT2P09544 360 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 FAM200BP0CF97 657 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 BCKDHAP12694 445 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 KRT13P13646 458 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 SDC1P18827 310 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 CYLC1P35663 651 aaPredicted RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 SOX6P35712 828 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 PTGER3P43115 390 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 RPS6P62753 249 aaKnown RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 ZFP36L1Q07352 338 aaKnown RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 ELP6Q0PNE2 266 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 PPP1R3AQ16821 1122 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 KRT71Q3SY84 523 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 LGSNQ5TDP6 509 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 MEDAGQ5VYS4 303 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 SLX4IPQ5VYV7 408 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 HIPK1Q86Z02 1210 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 ARL6IP6Q8N6S5 226 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 DTNBP1Q96EV8 351 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 AKR1E2Q96JD6 320 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 SLC30A2Q9BRI3 323 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 RPP25Q9BUL9 199 aaKnown RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 EXOSC3Q9NQT5 275 aaKnown RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 GMPPBQ9Y5P6 360 aa3.16□□□□□ -1.9
SMC4-225ENST00000497203 DDX49Q9Y6V7 483 aaKnown RBP3.16□□□□□ -1.9
SMC4-225ENST00000497203 SF3B1O75533 1304 aaKnown RBP eCLIP3.16□□□□□ -1.9
SMC4-225ENST00000497203 HCFC1P51610 2035 aa3.15□□□□□ -1.9
SMC4-225ENST00000497203 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.9
SMC4-225ENST00000497203 PPIAL4CA0A0B4J2A2 164 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 SDHDO14521 159 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 STX11O75558 287 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 PIGRP01833 764 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 PPIAL4GP0DN37 164 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 EPB41P11171 864 aaKnown RBP3.15□□□□□ -1.91
SMC4-225ENST00000497203 ANXA3P12429 323 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 CAPN2P17655 700 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 ACADVLP49748 655 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 ARHGDIBP52566 201 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 HMGCS2P54868 508 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 LMO4P61968 165 aa3.15□□□□□ -1.91
SMC4-225ENST00000497203 NUCB2P80303 420 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms