RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 CCNYL2Q5T2Q4 361 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 PRAMEF20Q5VT98 475 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 OPN5Q6U736 354 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 MAVSQ7Z434 540 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 OR4N5Q8IXE1 308 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 ZNF595Q8IYB9 648 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 RAB3IL1Q8TBN0 382 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 JSRP1Q96MG2 331 aaPredicted RBP9.33□□□□□ -0.92
C9orf78-207ENST00000495934 CENPKQ9BS16 269 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 MED18Q9BUE0 208 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 RPF2Q9H7B2 306 aaKnown RBP9.33□□□□□ -0.92
C9orf78-207ENST00000495934 COPS7BQ9H9Q2 264 aaPredicted RBP9.33□□□□□ -0.92
C9orf78-207ENST00000495934 CALHM2Q9HA72 323 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 SLCO1B3Q9NPD5 702 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 PRTFDC1Q9NRG1 225 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 THAP1Q9NVV9 213 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 NMRK1Q9NWW6 199 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 AHSPQ9NZD4 102 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 MMACHCQ9Y4U1 282 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 PCDHA9Q9Y5H5 950 aa9.33□□□□□ -0.92
C9orf78-207ENST00000495934 FGF17O60258 216 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 TMCC2O75069 709 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 LDB3O75112 727 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 CPN2P22792 545 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 TIA1P31483 386 aaKnown RBP eCLIP9.32□□□□□ -0.92
C9orf78-207ENST00000495934 SOX18P35713 384 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 MAPK12P53778 367 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 SPDYAQ5MJ70 313 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 C6orf136Q5SQH8 315 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 SLC22A10Q63ZE4 541 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 BHLHB9Q6PI77 547 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 DGAT2L6Q6ZPD8 337 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 BTLAQ7Z6A9 289 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 CLNKQ7Z7G1 428 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 WDR75Q8IWA0 830 aaKnown RBP9.32□□□□□ -0.92
C9orf78-207ENST00000495934 GOLGA6L1Q8N7Z2 621 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 C16orf78Q8WTQ4 265 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 CKAP2Q8WWK9 683 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 EGLN2Q96KS0 407 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 BEX2Q9BXY8 128 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 PIGMQ9H3S5 423 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 SH2D2AQ9NP31 389 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 ADAP2Q9NPF8 381 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 INTS9Q9NV88 658 aaKnown RBP9.32□□□□□ -0.92
C9orf78-207ENST00000495934 C1orf109Q9NX04 203 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 LYARQ9NX58 379 aaKnown RBP9.32□□□□□ -0.92
C9orf78-207ENST00000495934 MS4A12Q9NXJ0 267 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 PHF11Q9UIL8 331 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 MCM8Q9UJA3 840 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 WIF1Q9Y5W5 379 aa9.32□□□□□ -0.92
C9orf78-207ENST00000495934 YLPM1P49750 1951 aaKnown RBP9.32□□□□□ -0.92
C9orf78-207ENST00000495934 DYNC1I1O14576 645 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 RGS14O43566 566 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 PCDH7O60245 1069 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 PEX11AO75192 247 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 SEC22BO75396 215 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 SKAP2O75563 359 aaPredicted RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 SNUPNO95149 360 aaKnown RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 GPR75O95800 540 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 IL3P08700 152 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ANXA4P09525 319 aaPredicted RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 NR2F6P10588 404 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 NEFHP12036 1026 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 LOXP28300 417 aaPredicted RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 THBS2P35442 1172 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 DIO3P55073 304 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 TRA2BP62995 288 aaKnown RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 RNF4P78317 190 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 DUSP2Q05923 314 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ACSM2AQ08AH3 577 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 FAM27E3Q08E93 113 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 SLC13A2Q13183 592 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 RCAN2Q14206 197 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ETFDHQ16134 617 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 PDCD2Q16342 344 aaPredicted RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 SPIN4Q56A73 249 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 C6orf52Q5T4I8 152 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ATG16L1Q676U5 607 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ACSM2BQ68CK6 577 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 VASNQ6EMK4 673 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 FAM71E1Q6IPT2 247 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 NOXRED1Q6NXP6 359 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 CYP20A1Q6UW02 462 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 PAGE2Q7Z2X7 111 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 DDIASQ8IXT1 998 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 TMEM132CQ8N3T6 1108 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 FAM76AQ8TAV0 307 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 PAQR8Q8TEZ7 354 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 PTPMT1Q8WUK0 201 aaPredicted RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 TANKQ92844 425 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 INTS12Q96CB8 462 aaKnown RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 METTL2AQ96IZ6 378 aaKnown RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 MARK4Q96L34 752 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ZNF681Q96N22 645 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ZFP3Q96NJ6 502 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 EBPLQ9BY08 206 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 ALOXE3Q9BYJ1 711 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 WDR55Q9H6Y2 383 aaPredicted RBP9.31□□□□□ -0.92
C9orf78-207ENST00000495934 AKTIPQ9H8T0 292 aa9.31□□□□□ -0.92
C9orf78-207ENST00000495934 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms