RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SERPINE2P07093 398 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SLC35G4P0C7Q5 338 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 FCGR1AP12314 374 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 NAGAP17050 411 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 POLR2CP19387 275 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 PGCP20142 388 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 MMP11P24347 488 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 DUSP3P51452 185 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 EFNB2P52799 333 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 KRTAP10-12P60413 245 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 RPS13P62277 151 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 EWSR1Q01844 656 aaKnown RBP eCLIP3□□□□□ -1.93
PRPF4-203ENST00000488937 CNTN1Q12860 1018 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SRSF9Q13242 221 aaKnown RBP eCLIP3□□□□□ -1.93
PRPF4-203ENST00000488937 RCAN2Q14206 197 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 INPP5JQ15735 1006 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 USF2Q15853 346 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 ETFDHQ16134 617 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SLC15A2Q16348 729 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 CELF3Q5SZQ8 465 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 PDSS1Q5T2R2 415 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SLX4IPQ5VYV7 408 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 TCEAL6Q6IPX3 200 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 TTC23LQ6PF05 361 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 PARM1Q6UWI2 310 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 UNQ6126/PRO20091Q6UXV3 157 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 RAD9BQ6WBX8 426 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF782Q6ZMW2 699 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF66Q6ZN08 573 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 P4HA3Q7Z4N8 544 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 MRPL10Q7Z7H8 261 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 KIAA1328Q86T90 577 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 RANBP3LQ86VV4 465 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 TRIM69Q86WT6 500 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 CACUL1Q86Y37 369 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 PYROXD2Q8N2H3 581 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 FGFRL1Q8N441 504 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 FAM86B1Q8N7N1 296 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 C7orf57Q8NEG2 295 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 OR13C5Q8NGS8 318 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 C8orf46Q8TAG6 207 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 RHEBL1Q8TAI7 183 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 DDI1Q8WTU0 396 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 TMEM174Q8WUU8 243 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 ABTB1Q969K4 478 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 UPRTQ96BW1 309 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 MTBPQ96DY7 904 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SCRN2Q96FV2 425 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 PPP1R16AQ96I34 528 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 C4orf45Q96LM5 186 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 C12orf42Q96LP6 360 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 LURAP1Q96LR2 239 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 TSNARE1Q96NA8 513 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 COPS8Q99627 209 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SLC30A2Q9BRI3 323 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 C20orf24Q9BUV8 137 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 LAT2Q9GZY6 243 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 ILKAPQ9H0C8 392 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 MTIF3Q9H2K0 278 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 A4GALTQ9NPC4 353 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 CHST11Q9NPF2 352 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 OLFML3Q9NRN5 406 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 C1orf123Q9NWV4 160 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 CHMP5Q9NZZ3 219 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 IL36RNQ9UBH0 155 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 FZR1Q9UM11 496 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 AMDHD2Q9Y303 409 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SLC6A5Q9Y345 797 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 TIMM10BQ9Y5J6 103 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 MROH7-TTC4A0A0A0MT08 1334 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 NPIPA7E9PJI5 369 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 E9PQ18 207 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 BCKDKO14874 412 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 EFNA2O43921 213 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 HCN1O60741 890 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 GLRA3O75311 464 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 CLDN9O95484 217 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 ECDO95905 644 aaPredicted RBP2.99□□□□□ -1.93
PRPF4-203ENST00000488937 ATP1B1P05026 303 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 GSTT2P0CG29 244 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 GSTT2BP0CG30 244 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 NPIPA8P0DM63 369 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 IGHV4-31P0DP07 118 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 PRKAR1AP10644 381 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 MYOD1P15172 320 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 EZRP15311 586 aaKnown RBP2.99□□□□□ -1.93
PRPF4-203ENST00000488937 AOC1P19801 751 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 STOMP27105 288 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 CERS1P27544 350 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 HNRNPH3P31942 346 aaKnown RBP2.99□□□□□ -1.93
PRPF4-203ENST00000488937 CCKARP32238 428 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 CSTF2P33240 577 aaKnown RBP eCLIP2.99□□□□□ -1.93
PRPF4-203ENST00000488937 P2RY1P47900 373 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 KCNJ3P48549 501 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 ARHGDIAP52565 204 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 SLC7A2P52569 658 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 ATP1B3P54709 279 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 HMGCS2P54868 508 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 CLDN18P56856 261 aa2.99□□□□□ -1.93
PRPF4-203ENST00000488937 RPS18P62269 152 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms