RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 ERO1BQ86YB8 467 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ZC3H3Q8IXZ2 948 aaKnown RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 CCDC36Q8IYA8 594 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ZNF444Q8N0Y2 327 aaPredicted RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 SLC43A2Q8N370 569 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 PARP8Q8N3A8 854 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 PRSS35Q8N3Z0 413 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 PDCL2Q8N4E4 241 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ARFGAP2Q8N6H7 521 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 LRRC17Q8N6Y2 441 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ANKFN1Q8N957 763 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 THAP8Q8NA92 274 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 OR8J1Q8NGP2 316 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 TRMT10AQ8TBZ6 339 aaKnown RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 GIPC3Q8TF64 312 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 DNAJA4Q8WW22 397 aaPredicted RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 SPRYD4Q8WW59 207 aaPredicted RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 LIPHQ8WWY8 451 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 GLYATL1Q969I3 302 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ISG20Q96AZ6 181 aaKnown RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 HAVCR1Q96D42 359 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 RAB39BQ96DA2 213 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 NRBF2Q96F24 287 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 C8orf76Q96K31 380 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 C4orf36Q96KX1 117 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ANKRD27Q96NW4 1050 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 RAB40CQ96S21 281 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 PSMB7Q99436 277 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 S1PR3Q99500 378 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 CHP1Q99653 195 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ATF6BQ99941 703 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 OMDQ99983 421 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 CCM2Q9BSQ5 444 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ALKBH7Q9BT30 221 aaPredicted RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 TMEM43Q9BTV4 400 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 CCDC28BQ9BUN5 200 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 SLC2A11Q9BYW1 496 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 PNNQ9H307 717 aaKnown RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 CUEDC2Q9H467 287 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 FAM124BQ9H5Z6 455 aaPredicted RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 METTL7AQ9H8H3 244 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 MTHFD2LQ9H903 347 aaPredicted RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 ACTR8Q9H981 624 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 MARCH7Q9H992 704 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 CALHM2Q9HA72 323 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ZFP14Q9HCL3 533 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 RPRD1BQ9NQG5 326 aaKnown RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 ZNHIT6Q9NWK9 470 aaKnown RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 PKD2L2Q9NZM6 624 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ZNF490Q9ULM2 529 aaPredicted RBP1.58□□□□□ -2.16
USP9X-208ENST00000487625 RNF6Q9Y252 685 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 WDR83OSQ9Y284 106 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 CA5BQ9Y2D0 317 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 RNF115Q9Y4L5 304 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 GMEB1Q9Y692 573 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 COMMD3-BMI1R4GMX3 469 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 SPATA31D1Q6ZQQ2 1576 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 ABCC4O15439 1325 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 PHLPP2Q6ZVD8 1323 aa1.58□□□□□ -2.16
USP9X-208ENST00000487625 AKNAQ7Z591 1439 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 ATP10DQ9P241 1426 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 UNC13AQ9UPW8 1703 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 TRBV5-5A0A0J9YX44 114 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 A0A1W2PNV4 684 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 A0A1W2PPE3 182 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 PCP4L1A6NKN8 68 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 A8MUI8 341 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 TCP11X1B4DZS4 312 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 HSBP1L1C9JCN9 74 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 SPECC1L-ADORA2AF8WAN1 911 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 PDLIM1O00151 329 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 EEF2KO00418 725 aaKnown RBP1.57□□□□□ -2.16
USP9X-208ENST00000487625 BTN3A3O00478 584 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 CLDN5O00501 218 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 SDHDO14521 159 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 ARPC2O15144 300 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 ARPC3O15145 178 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 YKT6O15498 198 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 SYT7O43581 403 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 SNX3O60493 162 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 BCAS1O75363 584 aaPredicted RBP1.57□□□□□ -2.16
USP9X-208ENST00000487625 TRIM3O75382 744 aaPredicted RBP1.57□□□□□ -2.16
USP9X-208ENST00000487625 SAP30O75446 220 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 UPK3AO75631 287 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 KRT33AO76009 404 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 TXNDC12O95881 172 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 OPN1LWP04000 364 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 TPM1P09493 284 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 HIST1H2AGP0C0S8 130 aaPredicted RBP1.57□□□□□ -2.16
USP9X-208ENST00000487625 SP9P0CG40 484 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 PRKAR1AP10644 381 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 RALBP11234 206 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 ANPEPP15144 967 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 PRKACAP17612 351 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 HNF1AP20823 631 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 ATP6V1C1P21283 382 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 AZGP1P25311 298 aaKnown RBP1.57□□□□□ -2.16
USP9X-208ENST00000487625 U2AF2P26368 475 aaKnown RBP eCLIP1.57□□□□□ -2.161e-7■■■□□ 15.4
USP9X-208ENST00000487625 CD1BP29016 333 aa1.57□□□□□ -2.16
USP9X-208ENST00000487625 PRDX2P32119 198 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms