RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF446Q9NWS9 450 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 BLOC1S6Q9UL45 172 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 EIF3LQ9Y262 564 aaKnown RBP3.61□□□□□ -1.83
SMC4-218ENST00000486711 EXOSC1Q9Y3B2 195 aaKnown RBP3.61□□□□□ -1.83
SMC4-218ENST00000486711 AP4B1Q9Y6B7 739 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 CCDC7Q96M83 1385 aa3.61□□□□□ -1.83
SMC4-218ENST00000486711 COL5A2P05997 1499 aaPredicted RBP3.6□□□□□ -1.83
SMC4-218ENST00000486711 LRRC30A6NM36 301 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 CPLX1O14810 134 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 JAK2O60674 1132 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 PRAMEF12O95522 483 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 CSF2P04141 144 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 PCCBP05166 539 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 MELTFP08582 738 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 ACADSP16219 412 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 CAPN2P17655 700 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 SHC1P29353 583 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 ZNF33BQ06732 778 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 TFDP1Q14186 410 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 UBE2V2Q15819 145 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 CDKN3Q16667 212 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 MICAQ29983 383 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 BTNL3Q6UXE8 466 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 HACD2Q6Y1H2 254 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 LRRC70Q7Z2Q7 622 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 HIPK1Q86Z02 1210 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 FADS6Q8N9I5 356 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 UPRTQ96BW1 309 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 DNAJA3Q96EY1 480 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 ZBED6CLQ96FA7 236 aaPredicted RBP3.6□□□□□ -1.83
SMC4-218ENST00000486711 C9orf85Q96MD7 179 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 TSGA13Q96PP4 275 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 MRPL13Q9BYD1 178 aaKnown RBP3.6□□□□□ -1.83
SMC4-218ENST00000486711 ZBP1Q9H171 429 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 TMOD2Q9NZR1 351 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 LAMP5Q9UJQ1 280 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 RNF6Q9Y252 685 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 NTNG1Q9Y2I2 539 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 ATP6V0A2Q9Y487 856 aa3.6□□□□□ -1.83
SMC4-218ENST00000486711 A0A1B0GWJ7 208 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 E2F3O00716 465 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 PPIHO43447 177 aaKnown RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 LCMT2O60294 686 aaKnown RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 IGHV3-9P01782 118 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 IGFBP1P08833 259 aaPredicted RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 WNT2P09544 360 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 HSPA5P11021 654 aaKnown RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 EPB41P11171 864 aaKnown RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 KRT13P13646 458 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 SDC1P18827 310 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 PSMA2P25787 234 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 HTR2AP28223 471 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 CYLC1P35663 651 aaPredicted RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 DLSTP36957 453 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 HMGCS2P54868 508 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 ZFP36L1Q07352 338 aaKnown RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 PPP1R3AQ16821 1122 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 CCDC57Q2TAC2 916 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 MEDAGQ5VYS4 303 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 SULT1C3Q6IMI6 304 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 SLC39A4Q6P5W5 647 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 LHFPL4Q7Z7J7 247 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 OR5AU1Q8NGC0 362 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 ZNF671Q8TAW3 534 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 FNDC8Q8TC99 324 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 AKR1E2Q96JD6 320 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 RPP25Q9BUL9 199 aaKnown RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 RPS10P5Q9NQ39 176 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 CUTCQ9NTM9 273 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 CGNQ9P2M7 1197 aaKnown RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 GALPQ9UBC7 116 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 BARX2Q9UMQ3 279 aaPredicted RBP3.59□□□□□ -1.83
SMC4-218ENST00000486711 RNF115Q9Y4L5 304 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 PARD3Q8TEW0 1356 aa3.59□□□□□ -1.83
SMC4-218ENST00000486711 ANGPT2O15123 496 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 KBTBD11O94819 623 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 PIGRP01833 764 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 ASNSP08243 561 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 H2AFZP0C0S5 128 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 FAM200BP0CF97 657 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 ANXA3P12429 323 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 HMGCLP35914 325 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 RPS6P62753 249 aaKnown RBP3.58□□□□□ -1.84
SMC4-218ENST00000486711 ELP6Q0PNE2 266 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 SLC10A1Q14973 349 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 USH1GQ495M9 461 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 LGSNQ5TDP6 509 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 CBLN3Q6UW01 205 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 TMEM184AQ6ZMB5 413 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 PRSS48Q7RTY5 328 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 PARGQ86W56 976 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 FGFRL1Q8N441 504 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 OR6T1Q8NGN1 323 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 TFB1MQ8WVM0 346 aaKnown RBP3.58□□□□□ -1.84
SMC4-218ENST00000486711 ADIPOR1Q96A54 375 aa3.58□□□□□ -1.84
SMC4-218ENST00000486711 C11orf24Q96F05 449 aaPredicted RBP3.58□□□□□ -1.84
SMC4-218ENST00000486711 MCCC1Q96RQ3 725 aaPredicted RBP3.58□□□□□ -1.84
SMC4-218ENST00000486711 FEM1AQ9BSK4 669 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms