RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 OR6T1Q8NGN1 323 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 RASSF5Q8WWW0 418 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 ZNF347Q96SE7 839 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 CDC6Q99741 560 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 PIP5K1AQ99755 562 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 CMKLR1Q99788 373 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SPATA5L1Q9BVQ7 753 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 PRR14Q9BWN1 585 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 SLC26A1Q9H2B4 701 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 ACER3Q9NUN7 267 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 UBAP1Q9NZ09 502 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 TMEFF2Q9UIK5 374 aaPredicted RBP13.4□□□□□ -0.26
COL4A6-206ENST00000477085 LOXL2Q9Y4K0 774 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 PCDHGB3Q9Y5G1 929 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 B3GALT1Q9Y5Z6 326 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 CLCA3PQ9Y6N3 262 aa13.4□□□□□ -0.26
COL4A6-206ENST00000477085 FRS3O43559 492 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 KIAA0513O60268 411 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 BCAS1O75363 584 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-206ENST00000477085 UGT2B17O75795 530 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 FPR1P21462 350 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 RNF144AP50876 292 aaPredicted RBP13.39□□□□□ -0.27
COL4A6-206ENST00000477085 DAPP51397 102 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 GPR143P51810 404 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 PLAURQ03405 335 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 ILKQ13418 452 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 GANABQ14697 944 aaKnown RBP13.39□□□□□ -0.27
COL4A6-206ENST00000477085 ANKRD37Q7Z713 158 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF619Q8N2I2 560 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 OR52J3Q8NH60 311 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 TFAP2CQ92754 450 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 LMF1Q96S06 567 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 EPYCQ99645 322 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 ARHGDIGQ99819 225 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 REEP1Q9H902 201 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 USE1Q9NZ43 259 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 NCDNQ9UBB6 729 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 KCND3Q9UK17 655 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 A4GNTQ9UNA3 340 aa13.39□□□□□ -0.27
COL4A6-206ENST00000477085 LRP3O75074 770 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 HEXBP07686 556 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 RHCEP18577 417 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 PRKAR1BP31321 381 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 TRHRP34981 398 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-206ENST00000477085 PIGAP37287 484 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 HMGA2P52926 109 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 CDH12P55289 794 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 EEF1A1P68104 462 aaKnown RBP13.38□□□□□ -0.27
COL4A6-206ENST00000477085 HPCAP84074 193 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 E2F1Q01094 437 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 ZIK1Q3SY52 487 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-206ENST00000477085 DHRS4L2Q6PKH6 230 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 DHRS13Q6UX07 377 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF517Q6ZMY9 492 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF836Q6ZNA1 936 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 SLCO6A1Q86UG4 719 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 LSRQ86X29 649 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-206ENST00000477085 HIPK1Q86Z02 1210 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 ADIPOR1Q96A54 375 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 ULBP3Q9BZM4 244 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 GABARAPL1Q9H0R8 117 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 C8orf4Q9NR00 106 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 C14orf105Q9NVL8 296 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 PDP1Q9P0J1 537 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF443Q9Y2A4 671 aaPredicted RBP13.38□□□□□ -0.27
COL4A6-206ENST00000477085 KIF26BQ2KJY2 2108 aa13.38□□□□□ -0.27
COL4A6-206ENST00000477085 TNFRSF11BO00300 401 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 SYT5O00445 386 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 PCDH17O14917 1159 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 MITFO75030 526 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ALOX12BO75342 701 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ALBP02768 609 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 GNAO1P09471 354 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ITGA2P17301 1181 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 NBL1P41271 181 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 RFX3P48380 749 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 HOXC5Q00444 222 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 SPIBQ01892 262 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 MERTKQ12866 999 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 FOXD4Q12950 439 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 PIN1Q13526 163 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ZNHIT3Q15649 155 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 EXOC3L2Q2M3D2 409 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 STPG1Q5TH74 334 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 DEF8Q6ZN54 512 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 RAB11FIP2Q7L804 512 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 C9orf40Q8IXQ3 194 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 BCORP1Q8N888 145 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 NFAM1Q8NET5 270 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 OR14A16Q8NHC5 309 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 PHF10Q8WUB8 498 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 NRBF2Q96F24 287 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 LRFN5Q96NI6 719 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 MBOAT4Q96T53 435 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 WDR77Q9BQA1 342 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 OSBPL11Q9BXB4 747 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 NXF5Q9H1B4 397 aaKnown RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 SMPD3Q9NY59 655 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-206ENST00000477085 PRODH2Q9UF12 536 aa13.37□□□□□ -0.27
COL4A6-206ENST00000477085 ZNF223Q9UK11 482 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms